Detail information of GWHGAAEX018196/evm.TU.scaffold_90.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|661889528|emb|CDP07115.1|2.01E-14unnamed protein product [Coffea canephora]
trEMBLtr|A0A068UEX3|A0A068UEX3_COFCA8.00E-15Coffea canephora
TAIRAT3G452302.00E-08hydroxyproline-rich glycoprotein family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009726664862666941+
Transcript Sequence

Network for GWHGAAEX018196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.300
SRR2545915Juvenile tuber5.440
SRP108465SRR5643513five period of Gastrodia elata7.500
SRR5643514five period of Gastrodia elata10.990
SRR5643515five period of Gastrodia elata6.960
SRR5643524five period of Gastrodia elata6.030
SRR5643525five period of Gastrodia elata7.850
SRR5643528five period of Gastrodia elata7.970
SRR5643658five period of Gastrodia elata6.720
SRR5643659five period of Gastrodia elata15.860
SRR5643660five period of Gastrodia elata20.280
SRR5643661five period of Gastrodia elata16.110
SRR5643662five period of Gastrodia elata18.030
SRR5643663five period of Gastrodia elata17.490
SRR5643664five period of Gastrodia elata11.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.120
SRR6049655Rhizomagastrodiae_C368-T10_good_16.770
SRR6049656Rhizomagastrodiae_C368-T07_good_112.710
SRR6049657Rhizomagastrodiae_C368-T07_good_16.920
SRR6049658Rhizomagastrodiae_C368-T04_good_110.840
SRR6049659Rhizomagastrodiae_C368-T04_good_16.710
SRR6049660Rhizomagastrodiae_C368-T01_good_16.680
SRR6049661Rhizomagastrodiae_C368-T04_good_110.800
SRR6049662Rhizomagastrodiae_C368-T01_good_120.490
SRR6049663Rhizomagastrodiae_C368-T01_good_19.930
SRR6049664Rhizomagastrodiae_C368-T10_good_116.190
SRR6049665Rhizomagastrodiae_C368-T10_good_116.190
SRP279888GastroGastrodia elata tuber 10.82
JuvenJuvenile tuber5.06
Mother_GastroMother tuber of Gastrodia elata 7.20
Mother_JuvenMother tuber of Juvenile 4.75