Detail information of GWHGAAEX018207/evm.TU.scaffold_90.101


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428216828|ref|YP_007101293.1|1.00E-56Isopenicillin-N epimerase [Pseudanabaena sp. PCC 7367]
KOGKOG15490Cysteine desulfurase NFS1
nrgi|695073839|ref|XP_009384099.1|0PREDICTED: putative L-cysteine desulfhydrase 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LGZ2|LCYD1_ORYSJ0Putative L-cysteine desulfhydrase 1
trEMBLtr|M0RT43|M0RT43_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P17630_001}
TAIRAT5G265950Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009729976853011413-
Transcript Sequence

Network for GWHGAAEX018207

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00266.18Aminotran_5922744.70E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22207LCD Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.840
SRR2545915Juvenile tuber11.370
SRP108465SRR5643513five period of Gastrodia elata11.620
SRR5643514five period of Gastrodia elata13.810
SRR5643515five period of Gastrodia elata11.690
SRR5643524five period of Gastrodia elata13.390
SRR5643525five period of Gastrodia elata12.640
SRR5643528five period of Gastrodia elata10.790
SRR5643658five period of Gastrodia elata7.650
SRR5643659five period of Gastrodia elata15.530
SRR5643660five period of Gastrodia elata15.520
SRR5643661five period of Gastrodia elata16.760
SRR5643662five period of Gastrodia elata21.020
SRR5643663five period of Gastrodia elata15.610
SRR5643664five period of Gastrodia elata13.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.200
SRR6049655Rhizomagastrodiae_C368-T10_good_124.940
SRR6049656Rhizomagastrodiae_C368-T07_good_116.260
SRR6049657Rhizomagastrodiae_C368-T07_good_112.590
SRR6049658Rhizomagastrodiae_C368-T04_good_114.590
SRR6049659Rhizomagastrodiae_C368-T04_good_115.570
SRR6049660Rhizomagastrodiae_C368-T01_good_117.470
SRR6049661Rhizomagastrodiae_C368-T04_good_114.760
SRR6049662Rhizomagastrodiae_C368-T01_good_120.610
SRR6049663Rhizomagastrodiae_C368-T01_good_118.810
SRR6049664Rhizomagastrodiae_C368-T10_good_119.620
SRR6049665Rhizomagastrodiae_C368-T10_good_119.620
SRP279888GastroGastrodia elata tuber 15.38
JuvenJuvenile tuber13.90
Mother_GastroMother tuber of Gastrodia elata 11.28
Mother_JuvenMother tuber of Juvenile 11.09