Detail information of GWHGAAEX018216/evm.TU.scaffold_90.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719983568|ref|XP_010250800.1|1.07E-172PREDICTED: uncharacterized protein LOC104592942 [Nelumbo nucifera]
trEMBLtr|M0T1N1|M0T1N1_MUSAM5.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P25560_001}
TAIRAT1G675703.00E-134Protein of unknown function (DUF3537)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009734767513506878+
Transcript Sequence

Network for GWHGAAEX018216

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12056.7DUF3537404217.50E-133
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.620
SRR2545915Juvenile tuber25.270
SRP108465SRR5643513five period of Gastrodia elata21.570
SRR5643514five period of Gastrodia elata19.160
SRR5643515five period of Gastrodia elata18.680
SRR5643524five period of Gastrodia elata19.590
SRR5643525five period of Gastrodia elata32.720
SRR5643528five period of Gastrodia elata30.290
SRR5643658five period of Gastrodia elata32.140
SRR5643659five period of Gastrodia elata21.660
SRR5643660five period of Gastrodia elata20.900
SRR5643661five period of Gastrodia elata23.780
SRR5643662five period of Gastrodia elata18.740
SRR5643663five period of Gastrodia elata19.770
SRR5643664five period of Gastrodia elata19.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.380
SRR6049655Rhizomagastrodiae_C368-T10_good_135.480
SRR6049656Rhizomagastrodiae_C368-T07_good_121.100
SRR6049657Rhizomagastrodiae_C368-T07_good_124.730
SRR6049658Rhizomagastrodiae_C368-T04_good_120.220
SRR6049659Rhizomagastrodiae_C368-T04_good_121.600
SRR6049660Rhizomagastrodiae_C368-T01_good_123.740
SRR6049661Rhizomagastrodiae_C368-T04_good_120.890
SRR6049662Rhizomagastrodiae_C368-T01_good_124.560
SRR6049663Rhizomagastrodiae_C368-T01_good_118.650
SRR6049664Rhizomagastrodiae_C368-T10_good_123.150
SRR6049665Rhizomagastrodiae_C368-T10_good_123.150
SRP279888GastroGastrodia elata tuber 17.45
JuvenJuvenile tuber24.87
Mother_GastroMother tuber of Gastrodia elata 20.84
Mother_JuvenMother tuber of Juvenile 21.14