Detail information of GWHGAAEX018217/evm.TU.scaffold_90.118
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|479209328|ref|YP_007837263.1| | 6.00E-26 | Adenylate kinase [Faecalibacterium prausnitzii L2-6] |
| KOG | KOG3078 | 6.00E-59 | Adenylate kinase |
| nr | gi|672183070|ref|XP_008811800.1| | 1.37E-131 | PREDICTED: adenylate kinase 1, mitochondrial [Phoenix dactylifera] |
| Swissprot | tr|Q6ZJ48|KAD7_ORYSJ | 2.00E-101 | Probable adenylate kinase 7, mitochondrial (Precursor) |
| trEMBL | tr|M0RF82|M0RF82_MUSAM | 2.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P04050_001} |
| TAIR | AT2G37250 | 6.00E-59 | adenosine kinase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000097 | 3532964 | 3537994 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018217
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00406.21 | ADK | 78 | 263 | 3.30E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00939 | adk, AK | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Purine metabolism | map00230 | ||
| Thiamine metabolism | map00730 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process |
| GO:0019205 | Molecular Function | nucleobase-containing compound kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.350 |
| SRR2545915 | Juvenile tuber | 21.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.540 |
| SRR5643514 | five period of Gastrodia elata | 22.340 | |
| SRR5643515 | five period of Gastrodia elata | 18.690 | |
| SRR5643524 | five period of Gastrodia elata | 20.560 | |
| SRR5643525 | five period of Gastrodia elata | 14.430 | |
| SRR5643528 | five period of Gastrodia elata | 13.170 | |
| SRR5643658 | five period of Gastrodia elata | 7.280 | |
| SRR5643659 | five period of Gastrodia elata | 38.650 | |
| SRR5643660 | five period of Gastrodia elata | 49.070 | |
| SRR5643661 | five period of Gastrodia elata | 44.180 | |
| SRR5643662 | five period of Gastrodia elata | 48.040 | |
| SRR5643663 | five period of Gastrodia elata | 32.240 | |
| SRR5643664 | five period of Gastrodia elata | 28.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.290 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 45.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 33.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.340 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.240 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 42.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 42.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.81 |
| Juven | Juvenile tuber | 28.65 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.84 | |
| Mother_Juven | Mother tuber of Juvenile | 18.72 |