Detail information of GWHGAAEX018219/evm.TU.scaffold_90.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672172916|ref|XP_008806571.1|0PREDICTED: uncharacterized protein LOC103719217 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0S2U6|M0S2U6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P24890_001}
TAIRAT3G623306.00E-121Zinc knuckle (CCHC-type) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009736027453621185+
Transcript Sequence

Network for GWHGAAEX018219

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.720
SRR2545915Juvenile tuber36.090
SRP108465SRR5643513five period of Gastrodia elata27.580
SRR5643514five period of Gastrodia elata20.750
SRR5643515five period of Gastrodia elata19.380
SRR5643524five period of Gastrodia elata21.420
SRR5643525five period of Gastrodia elata14.800
SRR5643528five period of Gastrodia elata15.270
SRR5643658five period of Gastrodia elata11.230
SRR5643659five period of Gastrodia elata32.040
SRR5643660five period of Gastrodia elata31.080
SRR5643661five period of Gastrodia elata26.350
SRR5643662five period of Gastrodia elata27.210
SRR5643663five period of Gastrodia elata26.390
SRR5643664five period of Gastrodia elata28.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.390
SRR6049655Rhizomagastrodiae_C368-T10_good_117.670
SRR6049656Rhizomagastrodiae_C368-T07_good_123.160
SRR6049657Rhizomagastrodiae_C368-T07_good_125.420
SRR6049658Rhizomagastrodiae_C368-T04_good_124.720
SRR6049659Rhizomagastrodiae_C368-T04_good_126.910
SRR6049660Rhizomagastrodiae_C368-T01_good_127.430
SRR6049661Rhizomagastrodiae_C368-T04_good_121.920
SRR6049662Rhizomagastrodiae_C368-T01_good_125.610
SRR6049663Rhizomagastrodiae_C368-T01_good_126.270
SRR6049664Rhizomagastrodiae_C368-T10_good_125.530
SRR6049665Rhizomagastrodiae_C368-T10_good_125.530
SRP279888GastroGastrodia elata tuber 26.93
JuvenJuvenile tuber34.54
Mother_GastroMother tuber of Gastrodia elata 17.32
Mother_JuvenMother tuber of Juvenile 23.18