Detail information of GWHGAAEX018220/evm.TU.scaffold_90.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743783515|ref|XP_010921433.1|3.60E-23PREDICTED: probable WRKY transcription factor 48 [Elaeis guineensis]
Swissprottr|O22900|WRK23_ARATH3.00E-23Probable WRKY transcription factor 23
trEMBLtr|M0UA52|M0UA52_MUSAM4.00E-24Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP17930_001}
TAIRAT2G472609.00E-23WRKY DNA-binding protein 23

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009736322793632701+
Transcript Sequence

Network for GWHGAAEX018220

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY861064.10E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms188.930
SRR2545915Juvenile tuber106.060
SRP108465SRR5643513five period of Gastrodia elata157.030
SRR5643514five period of Gastrodia elata153.840
SRR5643515five period of Gastrodia elata131.190
SRR5643524five period of Gastrodia elata197.000
SRR5643525five period of Gastrodia elata171.290
SRR5643528five period of Gastrodia elata166.690
SRR5643658five period of Gastrodia elata105.230
SRR5643659five period of Gastrodia elata38.070
SRR5643660five period of Gastrodia elata34.690
SRR5643661five period of Gastrodia elata26.710
SRR5643662five period of Gastrodia elata47.410
SRR5643663five period of Gastrodia elata41.060
SRR5643664five period of Gastrodia elata25.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.430
SRR6049655Rhizomagastrodiae_C368-T10_good_178.150
SRR6049656Rhizomagastrodiae_C368-T07_good_129.330
SRR6049657Rhizomagastrodiae_C368-T07_good_177.130
SRR6049658Rhizomagastrodiae_C368-T04_good_1109.280
SRR6049659Rhizomagastrodiae_C368-T04_good_1125.560
SRR6049660Rhizomagastrodiae_C368-T01_good_163.140
SRR6049661Rhizomagastrodiae_C368-T04_good_1101.030
SRR6049662Rhizomagastrodiae_C368-T01_good_134.280
SRR6049663Rhizomagastrodiae_C368-T01_good_141.590
SRR6049664Rhizomagastrodiae_C368-T10_good_127.380
SRR6049665Rhizomagastrodiae_C368-T10_good_127.380
SRP279888GastroGastrodia elata tuber 77.62
JuvenJuvenile tuber74.93
Mother_GastroMother tuber of Gastrodia elata 943.23
Mother_JuvenMother tuber of Juvenile 1,022.91