Detail information of GWHGAAEX018224/evm.TU.scaffold_90.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307595888|ref|YP_003902205.1|2.00E-35hypothetical protein Vdis_1780 [Vulcanisaeta distributa DSM 14429]
KOGKOG15320GTPase XAB1, interacts with DNA repair protein XPA
nrgi|743783507|ref|XP_010921431.1|0PREDICTED: GPN-loop GTPase 1-like isoform X1 [Elaeis guineensis]
trEMBLtr|B9REL8|B9REL8_RICCO0Xpa-binding protein, putative {ECO:0000313|EMBL:EEF50221.1}
TAIRAT4G218000P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009738768043889809+
Transcript Sequence

Network for GWHGAAEX018224

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03029.16ATP_bind_1612991.00E-82
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.220
SRR2545915Juvenile tuber26.660
SRP108465SRR5643513five period of Gastrodia elata26.080
SRR5643514five period of Gastrodia elata30.230
SRR5643515five period of Gastrodia elata26.830
SRR5643524five period of Gastrodia elata27.400
SRR5643525five period of Gastrodia elata29.500
SRR5643528five period of Gastrodia elata21.840
SRR5643658five period of Gastrodia elata30.760
SRR5643659five period of Gastrodia elata24.340
SRR5643660five period of Gastrodia elata22.660
SRR5643661five period of Gastrodia elata25.580
SRR5643662five period of Gastrodia elata19.760
SRR5643663five period of Gastrodia elata20.970
SRR5643664five period of Gastrodia elata18.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.930
SRR6049655Rhizomagastrodiae_C368-T10_good_125.230
SRR6049656Rhizomagastrodiae_C368-T07_good_127.070
SRR6049657Rhizomagastrodiae_C368-T07_good_122.730
SRR6049658Rhizomagastrodiae_C368-T04_good_127.250
SRR6049659Rhizomagastrodiae_C368-T04_good_133.520
SRR6049660Rhizomagastrodiae_C368-T01_good_128.940
SRR6049661Rhizomagastrodiae_C368-T04_good_130.290
SRR6049662Rhizomagastrodiae_C368-T01_good_131.770
SRR6049663Rhizomagastrodiae_C368-T01_good_133.710
SRR6049664Rhizomagastrodiae_C368-T10_good_127.860
SRR6049665Rhizomagastrodiae_C368-T10_good_127.860
SRP279888GastroGastrodia elata tuber 20.88
JuvenJuvenile tuber24.02
Mother_GastroMother tuber of Gastrodia elata 24.81
Mother_JuvenMother tuber of Juvenile 17.47