Detail information of GWHGAAEX018227/evm.TU.scaffold_90.129
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743770417|ref|XP_010915492.1| | 1.91E-155 | PREDICTED: peroxidase P7-like [Elaeis guineensis] |
| Swissprot | tr|A7NY33|PER4_VITVI | 3.00E-124 | Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor) |
| trEMBL | tr|F6H521|F6H521_VITVI | 3.00E-147 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB47390.1} |
| TAIR | AT5G05340 | 7.00E-121 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000097 | 4111634 | 4113304 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018227
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 50 | 287 | 2.20E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.950 |
| SRR2545915 | Juvenile tuber | 43.670 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 287.350 |
| SRR5643514 | five period of Gastrodia elata | 69.530 | |
| SRR5643515 | five period of Gastrodia elata | 219.590 | |
| SRR5643524 | five period of Gastrodia elata | 154.010 | |
| SRR5643525 | five period of Gastrodia elata | 0.170 | |
| SRR5643528 | five period of Gastrodia elata | 0.710 | |
| SRR5643658 | five period of Gastrodia elata | 0.400 | |
| SRR5643659 | five period of Gastrodia elata | 188.490 | |
| SRR5643660 | five period of Gastrodia elata | 126.980 | |
| SRR5643661 | five period of Gastrodia elata | 256.880 | |
| SRR5643662 | five period of Gastrodia elata | 103.880 | |
| SRR5643663 | five period of Gastrodia elata | 128.110 | |
| SRR5643664 | five period of Gastrodia elata | 32.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.130 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 35.360 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.700 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 41.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.120 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.420 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.900 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.160 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 28.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 28.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.03 |
| Juven | Juvenile tuber | 9.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.09 | |
| Mother_Juven | Mother tuber of Juvenile | 17.60 |