Detail information of GWHGAAEX018241/evm.TU.scaffold_91.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG45613.00E-82Uncharacterized conserved protein, contains TBC domain
nrgi|672169265|ref|XP_008804656.1|3.86E-127PREDICTED: transmembrane protein 56-like [Phoenix dactylifera]
trEMBLtr|M0RSG9|M0RSG9_MUSAM2.00E-125Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P15390_001}
TAIRAT4G103603.00E-82TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008917354041767017+
Transcript Sequence

Network for GWHGAAEX018241

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.15TRAM_LAG1_CLN8522441.10E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.460
SRR2545915Juvenile tuber119.180
SRP108465SRR5643513five period of Gastrodia elata44.970
SRR5643514five period of Gastrodia elata41.370
SRR5643515five period of Gastrodia elata43.520
SRR5643524five period of Gastrodia elata42.380
SRR5643525five period of Gastrodia elata48.000
SRR5643528five period of Gastrodia elata66.400
SRR5643658five period of Gastrodia elata36.190
SRR5643659five period of Gastrodia elata97.280
SRR5643660five period of Gastrodia elata99.170
SRR5643661five period of Gastrodia elata105.290
SRR5643662five period of Gastrodia elata127.180
SRR5643663five period of Gastrodia elata137.280
SRR5643664five period of Gastrodia elata110.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.080
SRR6049655Rhizomagastrodiae_C368-T10_good_126.410
SRR6049656Rhizomagastrodiae_C368-T07_good_140.170
SRR6049657Rhizomagastrodiae_C368-T07_good_131.020
SRR6049658Rhizomagastrodiae_C368-T04_good_125.820
SRR6049659Rhizomagastrodiae_C368-T04_good_125.740
SRR6049660Rhizomagastrodiae_C368-T01_good_127.400
SRR6049661Rhizomagastrodiae_C368-T04_good_131.380
SRR6049662Rhizomagastrodiae_C368-T01_good_137.490
SRR6049663Rhizomagastrodiae_C368-T01_good_128.870
SRR6049664Rhizomagastrodiae_C368-T10_good_145.120
SRR6049665Rhizomagastrodiae_C368-T10_good_145.120
SRP279888GastroGastrodia elata tuber 121.07
JuvenJuvenile tuber48.97
Mother_GastroMother tuber of Gastrodia elata 52.78
Mother_JuvenMother tuber of Juvenile 56.93