Gene detail

Detail information of GWHGAAEX018242/evm.TU.scaffold_91.29

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434399872\|ref\|YP_007133876.1\|	5.00E-10	WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
KOG	KOG1517	0	Guanine nucleotide binding protein MIP1
nr	gi\|672136967\|ref\|XP_008792190.1\|	0	PREDICTED: regulatory-associated protein of TOR 2 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q0IQN5\|RTOR1_ORYSJ	0	Regulatory-associated protein of TOR 1
trEMBL	tr\|K4CRV4\|K4CRV4_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc09g014780.2.1}
TAIR	AT3G08850	0	HEAT repeat ;WD domain, G-beta repeat protein protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000089	1794495	1843788	+

Transcript Sequence
>GWHTAAEX018242 GAGGTGGAGGTGGAGGTGGAGGTGTACTGTACAAATTATTATAATTTTGTTATCGCAAGTTTCTTTTTCTCTCGGTTCCGCTTTGTCCACCACTTCCTCTCCGTCTCTATTTTCAAAAATCTAGGGTTTGTCTAGTAATCTGGGGTGGTTTCGGCGAGGATCCGGGAGCAGGAATGCTGGTGTTTCTGCGGCTGATCTCCATGCGCCGCTGGCCGAGCGGCTTTGTTGATTAGAAACGATCGATCGGCTGAGCAGACGTAGGACTTGACTCGCAGAGCTCTGTTAAGGTTGCGTAAGTTGGGACAGATGGTGATCGCGTGGCTAGGGAAGGGCTGAGGGCCACGAGAACTATTGGATGGCACTAGGAGATCGGATGGCGTCGCGGTTGTCGCAGTCGTCGGCATCGGTCTCAAGCCACCTTGATGAGTTCTCCAGCCGGGAGGCTGTGGATTCATACGGGCTGAGGAGGGAGTCAGAGACGGTTCCTGGTGATAATTCATCTCCGGAGGTGACCAGCATGGCGTACTTACCACAAACGGTTTTTCTGTGTGATTCCAGGCACGAAGGATTTGAGGAGTGCGTTCCCATGGGTCCTTCCGATAGCGGATTGGTCTCCAAATGGCGGCCCAAGGATAGAATGAAGACTGGTTGCGTAGCACTTGTTGTGTGTTTAAACATTGGTGTTGATCCTCCAGATGTAATTAAAATATCTCCATGTGCTCGAATGGAGTGCTGGATAGATCCATTCTCTATGACGGCCCCAAAAGCTCTTGATACAATTGGAAAAACTTTGCATACTCAGTATGAACGATGGCAACCTCGGGCTCGTTATAGACTACAACTTGATCCTACAGTTGAAGAAGTAAAGAAGCTTTGCAGTAGTTGTCGTAAAAATGCTAGGTCAGAAAGGGTTCTTTTCCATTATAATGGACATGGAGTTCCAAAGCCTACCACTAATGGTGAAATCTGGGTTTTCAATAAGAGCTATACACAGTATATCCCACTACCTATAAGTGAACTTGACTCCTGGTTAAAGACCCCATCAATATATGTTTTTGATTGTTCAGCTGCTGGCATTATTGTAAATGCTTTTATTGAGCGTCAAGAATGGAATGCTTCTGGTTCATCTGGTTCATCAAAAGATTGCATTTTGCTTGCTGCTTGTGCGGCAAATGAAAGTCTACCGCAAAGTGCTCAATTTCCTGCTGATGTGTTCACATCGTGTCTTACTACACCAATAAGAATGGCACTACATTGGTTCTGCTCCCGCTCATTGCTTCGTGATACTATTGATCATTCTTTGATCGACAAAATTCCTGGGCGTCAGAATGATCGGAAAACACTTCTAGGCGAGTTAAATTGGATTTTTACGGCCATCACAGACACTATTGCTTGGAATGCTCTGCCACATGACCTTTTTCAAAGATTGTTTAGACAAGATCTACTGGTTGCTAGTTTGTTCCGAAACTTTCTACTTGCTGATAGAATTATGAGAAGTGCAAATTGTACCCCAGTGTCATATCCTCTGTTACCATCAACTCATCAACATCACATGTGGGATGCATGGGATATGGCAGCTGAGATTTGCCTTTCTAAACTGCCACAGTTGGTTGATGACCCAACTGCTGAATTTCAGCCAAGTCCATTTTTTACAGAACAGTTGACAGCTTTTGAAGTGTGGCTAGATCATGGATCGGAGCATAAAAAGCCACCAGAGCAGTTACCTATAGTTCTGCAGGTTTTACTTAGTCAGTCTCATAGATTTCGAGCATTGGTACTTCTTGGGAGATTTCTTGATATGGGGCATTGGGCTGTTGATCAGGCCTTGTCTGTAGGAATATTTCCTTATGTTCTCAAGTTGCTGCAAACAACAGCTATGGAGCTGAGACAAATTCTTGTGTTCATTTGGACTAAAATTCTTGCTCTTGACAAGTCTTGTCAGATTGATCTTGTTAAAGATGGAGGCCATACCTATTTTATTAAGTTTCTCGATAGCATGGATGCTTACCCAGAGCAGCGGGCAATGGCAGCCTTTGTTTTAGCAGTCATTGTTGATGGCCATAGGCGGGGACAAGAGGCATGCATCCAAGCAAATTTGATACATGTATGCTTGAAACATTTGCATTTTGCAAACACCAATGAAGCACAGAGTGAGCCTATCCTTCTTCAATGGCTATGCCTTTGTCTGGGAAAATTCTGGGAGGATTATCATGAAGCACAAATCATTGGGTTGCAGTCAGATGCGCCATCTATTTTGTCACCTTTGTTGTCAGAGCCGCAACCAGAGGTTAGAGCTGCTGCTGTTTTTGCTCTTGGCACCCTTATAGATGTAGGATTTGACTCGTTCGGAGATGGAATTGGAGGTGATGAGGATTGTGATGTGGATGACAAGTGTAAAGCTGAGCAGAGTATCATCAAGAGTCTTATACAAGTTCTTGGAGATGGAAGCTCTTTGGTTCGGGCTGAGGTTGCTGTTGCTCTTGCTCGTTTTGGCTTTGGTCACATTAAACACTTGAAGTCAGTTGCTTCTGCATGTTGGAAGCCACACCCCAGCTCAACGCTTAGTTCATTGCCATCCCTTGTAAACATTAACAGTGCCAGTGGTTGTGCTGGCACAAACCAACTTGGCATGCATGGAAGTTCTCTTTCATCACAAAATGTTCCTGTGCTGAGAGTTGGAAGTGAAAGCACGGTTAGCACTCGAGATGGAAGGATCTCGACAAGCAGTCCCATTGCGTCCACAGGGATTATGCATGGTTCGCCTGTGTCAGATGATTCTTCACAACATTCAGACTCTGGCATATTGATAAAAGATAGTACCACTAATGGAGTTATTCATCATTTTAGATCAAGGTCTCTAGATAGCTTAGTTTATTCGCAATGTTTTATGGCGATGTCTACTTTGGTAAAAGATCCGTCACCTCGAATTGCTAGTCTGGGAAGAAGAGCGCTTGCCATTATTGGCATTGAGCATGTTGTTTCAAAAGGAGCAAAATACAATGGTGCAAGTGTTCACCAACCAGAATTATCTAGTCTATCCGCATCTCCTGCTTTTGGTTTGGCTCGTTCATCTTCTTGGTTTGACATGCATGCTGGCCACTTACCTATGACATTCAGAACACCTCCAGTTAGTCCCCCTAGGCAAAATTATCTTTCTGGATTGCGGCGAGTTTATTCTTTAGAGTTTAGACCACACCAACTGGGTTCCCAAGAGGCTGGGCTGGCTGATCCACTGATAGGCTCTTCCGGTTCTGGAACTTGTGAGCGTAGCCTACTTCCTCAGTCTTCTATTTATAACTGGAGTAGTGGACATTTTTCACGGCCTCTTCTTACTGCTGATGACAACGAGGATGTGTTGGACAGAAGAGAGCAAAGGGAGAAAATTGCACTCGATGGCATAGCTAAATGCCAGCATTCATCTGTAACTAAACTGAACAATCAAATTGCTAGCTGGGACACCAGGTTTGAGACTGGTACGAAAGCAACTCTACTTTTACCATTTTCTCCTACAGTTGTTGCTGCAGATGAGAATGCGAGAATCAGAGTTTGGAACTATGAAGAAGCGATACCATTAAACAGCTTTGACAACCATATTTCTTCAGATAGAGGTGTTTCAAAGCTCTGTCTTGTGAATGAATTTGATGATAGCTTGCTTCTTGTTGCTTCGAATGAAGGAAATATTCGGATATGGAGAGATTTCACCTTAAAGGGAAAACAAAAGCTTGCTACAACATTCTCTTCTATTCCAAGTCAGAAAGCTAGTGTTCAAGCTTCAAGTGCTGTGGTTGATTGGCATCAACAATCTGGTTATTTGTTTGCTTCTAGTGAGATGTCTTCTTCTGTCATGCTTTGGGATCTTGACAAGGAGCAAAATATTGGTTCTATTTCATTTTCAACTAATGAAAGCATATCTGCACTTTCTGTTTCTCAAGTTCATGGATGCCAGATTGCAGCAGGTTTTGACAATGGTTCAGTTAAGATATTTGATGTCAGAACTCCAGACAAGCCTGTTTGTGCGGCAAAACTGCATTCACAACGAGTCGAGAAAGTTATTGGGATTGGATTTCAACCAGGGCTTGACCCAAATAAGATTGTCAGTGCTTCTCAAGCTGGGGATATTCAATTTATGGACATTCGAAACCACTCTGAAGCTTACCTGACAATTGATGCCCATAGGGGCTCTCTGACTGCTCTGGCCATTCACCGGCATGCCCCAGTTATTGCAAGTGGATCGGCGAAGCAGATAGTCAAGGTTTTCAGCCTAGGTGGAGAGCAGCTGAGCATCATAAGATATTACCCCACTCTTATGGCCCAACGAATTGGCTCTGTCAGTTGCCTTGCCTTCCACCCTTACAAGGCCCTTCTAGCAGCTGGTGCAGCTGACGCCTGCGTATCCATTCATGCTGACGACAGCTATCAGGCAAAATAAAATGAACCCGCTCAAACACTGCAGCCTCTTTTCTACCATTCTGCTTTCAGTGGCTGCTGAATTGAAACGCTGAGCGACTCGTCCTCAACCTCGCCCTGTATCATTTTTCTTTTGTTCTGGTGTGCGTCTGAATATATCACTATTCATTAGCCTCCCCAGCAGAGCAGTAACCATGCCCTCGACAAGACTCTCTGGCATCTTGCATTAATTTTGGAGGCTCTAAAGAAATAAAACAAAGTTATCTAGGCAAATTAGGCTTGTTGTACATATTTCTTTCTATATATATATATATATATATATTGCTCCTTTTGTTCATTTTGTAAGTGTAGTCTTATAAATTATGATGATGGCCACCGAGGGAGCAGCATGGCCTGTTTGCTCTTGTTTCAATGTCTAGCATATATAAAATCATATATTTTTAAAATTTTCTGAAGAATCGCTGTACAAGTGTTGCTATAATCGACTGCTCAAAAAAGTCTTAAAATGGCAGTGGAATCATTTTAGCGTTTATTTTATTTGAGTTGACAGTAATAGCTGACTTTGTATTCTGTTGTTCATAAAGCATTATTGTAAAATCAAAGATTTGAAGTATTGTCGTGTTGGCAAATTGGTATTGGCCGCCGACTGCCATGCTAACTGCCTTCCAGGCTCGAATGGACTGTTCATTTCTAGTTAATGTACTCAAGCAGGAGAGCTTATTTATGTGTTCT

Network for GWHGAAEX018242

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14538.5	Raptor_N	95	246	1.30E-69

Protein Sequence

>GWHPAAEX018242
MALGDRMASRLSQSSASVSSHLDEFSSREAVDSYGLRRESETVPGDNSSPEVTSMAYLPQTVFLCDSRHEGFEECVPMGPSDSGLVSKWRPKDRMKTGCVALVVCLNIGVDPPDVIKISPCARMECWIDPFSMTAPKALDTIGKTLHTQYERWQPRARYRLQLDPTVEEVKKLCSSCRKNARSERVLFHYNGHGVPKPTTNGEIWVFNKSYTQYIPLPISELDSWLKTPSIYVFDCSAAGIIVNAFIERQEWNASGSSGSSKDCILLAACAANESLPQSAQFPADVFTSCLTTPIRMALHWFCSRSLLRDTIDHSLIDKIPGRQNDRKTLLGELNWIFTAITDTIAWNALPHDLFQRLFRQDLLVASLFRNFLLADRIMRSANCTPVSYPLLPSTHQHHMWDAWDMAAEICLSKLPQLVDDPTAEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQSHRFRALVLLGRFLDMGHWAVDQALSVGIFPYVLKLLQTTAMELRQILVFIWTKILALDKSCQIDLVKDGGHTYFIKFLDSMDAYPEQRAMAAFVLAVIVDGHRRGQEACIQANLIHVCLKHLHFANTNEAQSEPILLQWLCLCLGKFWEDYHEAQIIGLQSDAPSILSPLLSEPQPEVRAAAVFALGTLIDVGFDSFGDGIGGDEDCDVDDKCKAEQSIIKSLIQVLGDGSSLVRAEVAVALARFGFGHIKHLKSVASACWKPHPSSTLSSLPSLVNINSASGCAGTNQLGMHGSSLSSQNVPVLRVGSESTVSTRDGRISTSSPIASTGIMHGSPVSDDSSQHSDSGILIKDSTTNGVIHHFRSRSLDSLVYSQCFMAMSTLVKDPSPRIASLGRRALAIIGIEHVVSKGAKYNGASVHQPELSSLSASPAFGLARSSSWFDMHAGHLPMTFRTPPVSPPRQNYLSGLRRVYSLEFRPHQLGSQEAGLADPLIGSSGSGTCERSLLPQSSIYNWSSGHFSRPLLTADDNEDVLDRREQREKIALDGIAKCQHSSVTKLNNQIASWDTRFETGTKATLLLPFSPTVVAADENARIRVWNYEEAIPLNSFDNHISSDRGVSKLCLVNEFDDSLLLVASNEGNIRIWRDFTLKGKQKLATTFSSIPSQKASVQASSAVVDWHQQSGYLFASSEMSSSVMLWDLDKEQNIGSISFSTNESISALSVSQVHGCQIAAGFDNGSVKIFDVRTPDKPVCAAKLHSQRVEKVIGIGFQPGLDPNKIVSASQAGDIQFMDIRNHSEAYLTIDAHRGSLTALAIHRHAPVIASGSAKQIVKVFSLGGEQLSIIRYYPTLMAQRIGSVSCLAFHPYKALLAAGAADACVSIHADDSYQAK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07204	RAPTOR	PI3K-Akt signaling pathway	map04151
		AMPK signaling pathway	map04152
		mTOR signaling pathway	map04150
		Autophagy - animal	map04140
		Autophagy - yeast	map04138
		Autophagy - other	map04136
		Insulin signaling pathway	map04910
		Longevity regulating pathway	map04211
		Longevity regulating pathway - multiple species	map04213
		Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	71.510
SRP064423	SRR2545915	Juvenile tuber	62.340
SRP108465	SRR5643513	five period of Gastrodia elata	38.180
	SRR5643514	five period of Gastrodia elata	33.850
	SRR5643515	five period of Gastrodia elata	36.490
	SRR5643524	five period of Gastrodia elata	34.800
	SRR5643525	five period of Gastrodia elata	43.950
	SRR5643528	five period of Gastrodia elata	39.470
	SRR5643658	five period of Gastrodia elata	41.820
	SRR5643659	five period of Gastrodia elata	45.340
	SRR5643660	five period of Gastrodia elata	53.520
	SRR5643661	five period of Gastrodia elata	43.300
	SRR5643662	five period of Gastrodia elata	46.570
	SRR5643663	five period of Gastrodia elata	47.980
	SRR5643664	five period of Gastrodia elata	54.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	43.400
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	36.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	50.690
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	47.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	57.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	48.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	49.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	39.880
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	43.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	36.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	36.700
SRP279888	Gastro	Gastrodia elata tuber	56.35
	Juven	Juvenile tuber	62.18
	Mother_Gastro	Mother tuber of Gastrodia elata	56.11
	Mother_Juven	Mother tuber of Juvenile	66.68