Gene detail

Detail information of GWHGAAEX018243/evm.TU.scaffold_91.30

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1087	1.00E-19	Cytosolic sorting protein GGA2/TOM1
nr	gi\|672118779\|ref\|XP_008782609.1\|	1.67E-34	PREDICTED: putative uncharacterized protein DDB_G0290521 isoform X3 [Phoenix dactylifera]
trEMBL	tr\|M0U190\|M0U190_MUSAM	2.00E-32	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P17830_001}
TAIR	AT5G01760	1.00E-19	ENTH/VHS/GAT family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000089	1966496	1976844	+

Transcript Sequence
>GWHTAAEX018243 AAAATAAAATAAAAAATAAACAAAATAAAGGAAAAATAGAAAAAAACCAAACAGTCACAAAAAACTCTTGTTAGAGAACCTCGCAAAATGTGGTCTCAATAAATGAAAATAAAAATGAGAGAGGAAGCTAATGAGCTCCAACAGATGAAGTCAACGATCGCATCTTTTTCTAAGGTTGTAACATGACTTCTTTGAGTTGAAACTTTTCTTCTGTTTCTTCTTTTTTACCCTTTTGCTTGAGAAATTTTCAAGATCATTGATATTCTCCGCAACCGTACTATCCAAATCGGAGTTTCCCCCAATCCATCGACCGAAGGAGACGATGTTGGGGTATCTCGCTGGCTTAGAACTATTAGAATTTTAGTTAAATATTGTTGGAGTAGATCTGTAGAGCAAACCCTCAACATTCTGACGTTATGATAGATCATTGGGGTATAGTCCCTCAACACGGATCCTCAGGATATATTCCCTTAACATGGATCCTCAAAATTTCACAGGTAGCCAAAATCGCTCCCGAAGTTTATTTGGTGAGAATTCATAGCCGAATAAGTCCGCCTCTGTACCGTTATTGTCCGACAGCATTACAAGTGCATTGGCCACTCGACGGGCCAAGCCAAAGGACCAGGAGATTCAACCACTGTGATTTCCGCAGCATCTCTATCCAATTGAACTTAATTCTCTGGTGGCGCCCTTGTGCCGGTATTAAAGGGACCCAACGGTAATTCCAAACAGCCACTTCGTTGGCCCCTACACCAACCACATGACTGGGATGAACATCCTTTGCTGAGCTCCCACCAATATCTTCGGCTATGGTTAGAGCCATTACCAAAAATGGTTAGCCATCTACAACCTGAATTACTTCATTCCGGTTGAGGGATTGAGGGTCTTCTATAAGCACACAATCCTGTCCTCTATCCTCCCCAATTTCGTCTAGTGTGGTGGGTTCGGCCGAGTTTGCATTAGCCAACACATTCCCAACTTCAACAATTGGAGTTACACAATGAGGGGGTGTTGTCCAAAACAGCTCATTGTTTACGATCCCCTAGAACATACACCATTCTCGGTTTGGCTCTTGTGATCGGCTTATGTGCACTCTTTTCTTTTTTGAATTAGATGCGGGTGTAAAGTTGAAACAGTCTGTGGAATTGTGTCCAATTAAATTGCATTTCGAGCAAAAAATGACAAAATTTTGAACCTTTATCTCTTGGTAATAACTATTGAATTCATCTCCTATCCAAATTATGTTTTTAAAACGCTCAGTAAGGTCAATTTCCACAAGGATTCGAGCCACCGATGACCTAAGTGGATTTTCCGTAGCAAAATCTACCTTGAGTGGCTTGCCAAAATAGGAGGCAGGCCAAGGAGTATAGAATACCATTATTGATCAAATGCGCTTTAAGGAGAGGAACGCTTATCCATTTAGGAACTATAGGAGTTTCACAACTCGGATCATAAGCGGTTGACCACTTCAAGATTTTCATATGGAAGTTTGAGATAAAATAAGACCCCCTCAAGAAGAGTCTTGTGTAATCTTGCTCACACGAAAGTTTTATTAGGACATGCCGGTGGTCAACTAAGTCAACGGTATATGCTGCTGACAATCCCATATCATTGAAAATGTTTCTAATTACAAGCGTATGGGGCTTGCCATTGTGAAACTTCCCTATCAGTGTGAACTTGAATGGCTTATCCAATATGTCTATCTCTTCCTTGGACAAGATGAGAGCCGGTTTACCTCAGCATCGAGATTGATTTGATACTGATAGGACGTGAGGAGCTAGTCAACACATCAAGGAAAGATGTAGGAGCAAGAGGTGGAGACACGGGTTTTGTATGAAGATTTGGAAGGACCTCCCTGCAACATATCTCTTGTGGATCCATAACTCGGTGCCAAATAGAACGCAGCACTTCACAGCAAAGCCGTCTTTCCCTTACGCTATCTGCCTCACTTGAGAGGAAATGGCAGCAAGGTCTGCATGTATCGAATCTCACGGGAACTCTGAGCACGAGAAGGTGTCAGCGCCATACCCGAGAGCTCTGCCAAATATATATATGCATACAATATAAGATTAACATGAAAGAAATTATTAGAGTAATACGTCAATAAATAGTGAATTTTCTCTTAATATTAGCAATTCAAGTACTTCAAAACTAATGACTGAGATGGTGATCCTTGTGCATATATCTAGTAGTCTCAATTAAGCAAAAAGATAATTATTCTTCGCTTCTTTTTCAAATTAGAAGGGCAAATTAAAGGTCAATTAAATTTGTTACTACTGCATTTCTAGTTCTTCTTTACCTGGTGATCATGCGTAATTTCTTATTGGCATTATTTGATGAAATGATTTGTACTTCTCCTTAGATTTCTTAAGTAAAATCTGTCATTCGATCACCAAAAAGATTATGAAAATTAGCCATTCAACACAAGAATCTTGCCTTTTTTACAAACACGCTCTTCTCAGTCCACTAAATGTCATTCAAGTTCTGTTATTTTTCTAATGCAATAATGGAATACTTTTCTCTTTCTTTTTCTTATACCGTTTATTAATCTTTGTAGTAGTAAATGTTGATCTTGTCTCTCTACTAAATTTTATTCAAGTTCTTTTTATCTTTCCTAAGCAACAATGATATGCTTTTCCCCTTTGGTGAGAATTCTTTGCTCTCAAATCTTCTGGCTTAAATGCATTGCCTGGTGGTTCGATCTCTATGCTCCTTTATTCATATTATTGTCTGACTGTATTTGATGTATGTTTTTGGTGTATTTTTATGGCAGCTTTGGCCATATGAGTTGTTTTCACGTTATCAGATAATAGTCATGCCTTTCTGCAGTGCTGGTGGTGCCTTCATCATTGGCTGATGAAGGATGATGTGAGATCTCTCTGGCTCTCTTTGCTCGAGGGCTCATTTCACTTTCTTTATTCAGATTTTGTATACCTTCGGATATTACTCTTTAGGTGTGCAACCTCATCGAGAGCCCTCATCTCACACTGCCTTTGGTAACTGAGTTCGGAGTCCTCTTCCTGTTTACTTTTGCTCTTTTGGTGTTTAGTAAAGCTGATCTTTTGTATCGTATCTATTTGGTTATTTTGTTATCTTCTGGAAATAGCTCTCTATTATAACTTGAATACAAATTATGCTCACTTTTTTTCCATCTTGTTTAATGAATTGGACTAAGTCCTTCAAAAAAATGTTGAAAGCTGAATATTTGTTTTTTCCTTCTGGTAGAATTTTCCAACAAATTGTTATTCAGGGATGATACATGGACGCATTTAGCCATATAAACACACATGGAAATGACATGCATTAAGATAACAGTGACATAAATTATGACGCAACAGAAAAAGCACAAACATCTAAAGATATTGGAGGATGGTATAATGAATTTATCTGCTCTAACCGTTCATGCTTTATGCAGAGATCTGGATTCCAGTTCCCAGGGAACCCAAAAAAAGCTGATCAGATGCTTTCCCTTACTGGCCCAATAGTGAATGAACCTCAAATAAACTGCAACATTCCGACCAACCCTATTGGAAGACCCCATGAACATTTCAGTTTATCAGACTTGCACAATATCCAAAATGTTATGGAGTTGTTCAACAATATGCTGGACGCTGTGAATCCAAATGATCAAAAGGTCATCAAAGGTGATGCTTTCACTAATCTTCTTAAACAGTGCGATATTAATCAGAAGAAGCTTGTGCAGCTGATAAATTCTACAGAGAAAGACCCGCTCTTGGCTGAAATTCTTACATTGAATGACAGTTTACAAACAGCTCTTTCAAAACATGCTGCTCTAGTTTCCGAATCTTCATTACCGCCAGGAAAAACATCTCAGGCTCCTCAAATACCAAGCCTTTCCGCTGTTACTGTTGCAGAGAGTTCCCAATTTGACGGCAAAGTGGTAGAAGAAGAAGAAGAAGATGATGATGATGATGGCTTTTCTGCGTTGGCTAAAAGGAATTCCATCAATAATTCAATAACCACTGGAACATCTGCTAAGAATTCTTTAGAGAACCTTACGTCTGTATCAAACAATGCTCTAGTTGTGCCTGATCAACCAGCCCCAGCTAGTTCTGCAAGGAAAGGGCAAGACATGCTCGATCTCCTCAGCTTCAATTGGCCGCCAAGACAATCCCAGCAAAATCCGCAATTGCTATCCCCAACATATACATTAATTCAGAATCAAAATCCATTCACTGATTCTTCTCTCATATGGGAACAGTACCCAACCTCTCCTCATCCTCTCGCTTCAAATAACGAAGGATATGCTTCCCCAAATTATCATGGTTATGTGGTACCATGGGCTCGGTCTTACCCTGCTGCCACACCGTCACTGGAGATTTCTCCAATTTTTTCTCCATCCGAAGGAAGTTCTAATCCCTTTCTATCAGCAGCATATATCGAACATCCAGCAGCCCAAGCTGTTATATCCAATGCCCAGAAATTTTGCTCTTAG

Network for GWHGAAEX018243

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03127.13	GAT	56	131	2.40E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006886	Biological Process	intracellular protein transport

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.840
SRP064423	SRR2545915	Juvenile tuber	5.040
SRP108465	SRR5643513	five period of Gastrodia elata	3.920
	SRR5643514	five period of Gastrodia elata	3.980
	SRR5643515	five period of Gastrodia elata	3.980
	SRR5643524	five period of Gastrodia elata	3.550
	SRR5643525	five period of Gastrodia elata	3.220
	SRR5643528	five period of Gastrodia elata	3.560
	SRR5643658	five period of Gastrodia elata	3.970
	SRR5643659	five period of Gastrodia elata	3.230
	SRR5643660	five period of Gastrodia elata	3.460
	SRR5643661	five period of Gastrodia elata	3.220
	SRR5643662	five period of Gastrodia elata	3.310
	SRR5643663	five period of Gastrodia elata	4.740
	SRR5643664	five period of Gastrodia elata	3.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.170
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.380
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.150
SRP279888	Gastro	Gastrodia elata tuber	5.85
	Juven	Juvenile tuber	6.04
	Mother_Gastro	Mother tuber of Gastrodia elata	9.91
	Mother_Juven	Mother tuber of Juvenile	13.23