Detail information of GWHGAAEX018260/evm.TU.scaffold_91.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|297735559|emb|CBI18053.3|3.28E-34unnamed protein product [Vitis vinifera]
Swissprottr|F4HNU8|OFP4_ARATH9.00E-25Transcription repressor OFP4
trEMBLtr|A0A067DFZ5|A0A067DFZ5_CITSI5.00E-31Uncharacterized protein {ECO:0000313|EMBL:KDO37952.1}
TAIRAT1G069203.00E-24ovate family protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008936920213693120-
Transcript Sequence

Network for GWHGAAEX018260

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13724.5DNA_binding_21377.70E-13
PF04844.12Ovate1692248.40E-21
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.290
SRR2545915Juvenile tuber3.840
SRP108465SRR5643513five period of Gastrodia elata5.590
SRR5643514five period of Gastrodia elata3.050
SRR5643515five period of Gastrodia elata5.060
SRR5643524five period of Gastrodia elata2.510
SRR5643525five period of Gastrodia elata2.120
SRR5643528five period of Gastrodia elata2.660
SRR5643658five period of Gastrodia elata1.460
SRR5643659five period of Gastrodia elata18.880
SRR5643660five period of Gastrodia elata7.030
SRR5643661five period of Gastrodia elata10.980
SRR5643662five period of Gastrodia elata9.180
SRR5643663five period of Gastrodia elata5.270
SRR5643664five period of Gastrodia elata28.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.400
SRR6049655Rhizomagastrodiae_C368-T10_good_131.720
SRR6049656Rhizomagastrodiae_C368-T07_good_19.100
SRR6049657Rhizomagastrodiae_C368-T07_good_110.110
SRR6049658Rhizomagastrodiae_C368-T04_good_13.890
SRR6049659Rhizomagastrodiae_C368-T04_good_12.810
SRR6049660Rhizomagastrodiae_C368-T01_good_12.740
SRR6049661Rhizomagastrodiae_C368-T04_good_17.380
SRR6049662Rhizomagastrodiae_C368-T01_good_15.810
SRR6049663Rhizomagastrodiae_C368-T01_good_13.510
SRR6049664Rhizomagastrodiae_C368-T10_good_14.350
SRR6049665Rhizomagastrodiae_C368-T10_good_14.350
SRP279888GastroGastrodia elata tuber 10.48
JuvenJuvenile tuber1.32
Mother_GastroMother tuber of Gastrodia elata 1.69
Mother_JuvenMother tuber of Juvenile 0.53