Gene detail

Detail information of GWHGAAEX018273/evm.TU.scaffold_92.10

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743870534\|ref\|XP_010906070.1\|	4.53E-69	PREDICTED: uncharacterized protein LOC105033113 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0SNQ6\|M0SNQ6_MUSAM	2.00E-67	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P13910_001}
TAIR	AT3G08490	1.00E-46	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	421875	425193	+

Transcript Sequence
>GWHTAAEX018273 AGAGAAGGCCATCCCAACAAATAAATGGCTATGGCTGATTTCCCCGTGGCAGATGAAGAAGCCGCTCTGGTGCTGTCCTCCAGCGACCCTCTCTACTATGTACAGAGCCCCTCCGCTGCCTCCCCTTCCACTAATATCCACCTCTTCTCTCCCTCGCTCTACTCCTCCTCTTCTTCCTGCGGCTCCAACATCAACTCCTTAGTGGAGGACAAGAAGCAAGCAATAATGGAGCAAACGAGAGGAGGCGGCATCACCGGTTTGATGGACAAACTGCTGCTTCCCCATCAATCCCGCTCTTTCTGCTCTCTAGCTTTCCATTTGGGCTGGAGGATGGCGGTAAGCTTATCCATCGCTCTTCTGGTTTTCTTCCTGGCTACCAATCCTCCCGAGCCCCAGCTATCCGTCAAGAATGCGGAAGTTGGACACTTTCGTCTTGGAGAAGGATTGGATGAGACGGGAGTTGCGACGGAGTTGATTTCCTGCAATTGCTCGGTTGAAATGGAGGTCGATAATAACTCAAACTTCTTCGGCTTGCACGTTCATCCTCCTTTGTTGGAGTTGATGTTTGGCCCTCTCACCTTCGCAAGCGCAAAGAGCCAAGCATTTTATGTTGAAAGCGCAAGCTCTTCATTAAGGCGATTGTTCATCGGAGTAAGAAACAGACCAATGTACGGCGCGGGGCGGAATATTCAAGATCTGCTCCAATCTGGGCGAGGTTTATCGCTGACTATTCGAATCAGAACGCCAACGGCTTATCGAGTGGTTTGGGATTTGATTAAGATCGAACGCCTTTACCTTCATGATTGCTTCGTATTTCTTCAAGCCATGCACGATGTCAAATATTATGCTAACATGTATAGCAGTGGTTGCTTCAACTCATGAATAACATAAATTTATTCATATTTTATATATTGAACATTGGCAGCCCAGCAGTTACTGTGAGTTCGGCCTTGAGAATTTCGCGGTAGCGGCGGACAACCCGGTGAAGATGGAAGCGACGGAGAGTTTGAGTTTAAATGTAATTTTAGTGATAATAAATTCAAAGATTCTTCGGTTTTTGTTTAAGTTTAAGACACTCCGAGCTCAGCTCGATCACAAGCCGGCTAGACAAACTTGTAAAATTTGTATTTTGCTCGGTAATTTATGAGTAAACTTAATTAGAATAATGATTTGTTATGCTAATCAATTTTAGTATATGTTAAGCATAAACAAGCTAGCTTGACTCCTGAGCTTAAGCTCGAGCACGGCTCGTGAACTTGTACAAGGGAACGACAAAGAACAATACCCCTCCCAAGCATTCGGTTGCAACAAAGCTATTTGGGGGTGGAAAGAGACAAGATTTCATCATCATTTTTAGCCTGAAGAAGATGTGAGCAACAAGAAACGAAAAGAAAGTGAAGCTTTAGCAAAGTACTCTGTGCTACTATCAATGATTTTGCCTTTGGCTTATATTTTTTTATTGCACAAAGTACTTGAGAAAATGAATGAACTCATATTGGTTTATTTTTAATTTGCATTCAAGAAATATCTCTCCTTAATTAAGAAGGGAATTATACGTATATATAGTGTATTTATATGTGCTATTTCTTTCTAAAATTTTGAATTGCTGAACTTGGAAACCGAATTCATGAAAGCTTTGTGATTGAAGCAGGCTTCTTTGTTTGGAGAATTGATTAACCTATTATTTGAAAATTGTTGTCCAAAAGATTAGATTGAAGGAGATGAATCTGCACCTCCTGAGCTGATCACAGGCAGAGCTTTGTTCTCTATTTCGCAAGCAGAACATCGTTCTTGAGCAGAGATACGCAGCCGCAGCTTCGTCGAGACGCCTGTGGGAGCCGCACGACCTCCTCTTTGCCGAATGGGACGCTGTCGAACGGCTCCTGCAACTGCATCCTTTGGAAGATCAGTTTTTTTGTCTTCGTATGCTCAATTATTTTTATTTTGAATTTGCCTTAAAAATTAGTGAAATTTATTTGAAAGCAGAATTCGTTGAAAGTTATTTCAAAGACATCAAAATTTAATGGTGCAGCAGAAAGAATGAATCGTGGAGTGAGTTATATGCACGCTATCTCATTTAAGTACGATCAAATCTTTTGGAGCAGAGGCTTTGTCATTAGCTGCCTACATTGTCAAGTTCATCACTTTGCCTCTTGAGGTTCCCATAGAAATCTAGTATGATAAAAGAGTTCCTTATTATCTATCACTTGAGAGTTCTTAGTTATAGGGTATTTATACATATTTCAAAAGATGAGAGGCCAAATGTGAATGGAAATGAGTGCATTTTTTGGGGCTATGGCCGAGATGAGTTAAGCTACATGCCGTGGGATCATATGACAAAGAAATCAACCAAAAATTATGATGATGTTTTTACGGAGGACCTATCGCAGCCAGATATTCAAATGGTGAAGGCATCTTTCACTTCCAAAGTCAACAGCATGCCAAACCTTCATGTAACACCACGAGCTAAGAGACATGAAGAAGATGTTGATGAGGAGAGGAATAGCGGAATCAGATAGAACCATAACAATTAGAAGAGATTGTGGAAGAAGCCCCTATTTTGAGGAGATTACCAGACTACATGTTCCTTGTACAAGATTTATTGTTCATAATTATTTCCTATTAACCGATGCTAGATAAATAAAATGCTTTCATGAGGCCAAGGTGGGATAAGCACGAGGATAAATTGGGCGGTGAAGGATGAGTTAAAATCCCTTTATGAGAATCATACCTTTGATTTGGCGAAATTATCTACCTGAAGGAAAGTCTTGAAGAACAAATGAGTGTTTGAGATAAAGCACCAAGAGCATAATCTAGTATCCAAGTACAAAGCAATTTGGTGGTCAAGGGTTTTGGTCAGAAGAAATGTGCACATATTGAAGAGTTATTTGCACCTTTTGTGAAGATGGCATCTATACAAATAGTTTTGGAATTAACAACTAGTTTGAATCTAGAAATATAATAGATGGATGCGAAGATAGCCTTTCCGCATGTCAAGTTATAAGAAAAAATCTATGTGGAGTAGTAGCCAATAAGTTCTACAAAGAAAGGAAAGGAAGATTATGTGTTATGATGTGGAGATCAATTAAATCATCAA

Network for GWHGAAEX018273

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module12

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.570
SRP064423	SRR2545915	Juvenile tuber	0.300
SRP108465	SRR5643513	five period of Gastrodia elata	0.850
	SRR5643514	five period of Gastrodia elata	0.420
	SRR5643515	five period of Gastrodia elata	0.570
	SRR5643524	five period of Gastrodia elata	0.570
	SRR5643525	five period of Gastrodia elata	0.580
	SRR5643528	five period of Gastrodia elata	1.060
	SRR5643658	five period of Gastrodia elata	1.260
	SRR5643659	five period of Gastrodia elata	0.240
	SRR5643660	five period of Gastrodia elata	0.590
	SRR5643661	five period of Gastrodia elata	0.400
	SRR5643662	five period of Gastrodia elata	0.670
	SRR5643663	five period of Gastrodia elata	0.200
	SRR5643664	five period of Gastrodia elata	0.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.590
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.360
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.280
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.390
SRP279888	Gastro	Gastrodia elata tuber	0.70
	Juven	Juvenile tuber	0.47
	Mother_Gastro	Mother tuber of Gastrodia elata	4.15
	Mother_Juven	Mother tuber of Juvenile	4.40