Detail information of GWHGAAEX018292/evm.TU.scaffold_92.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743884008|ref|XP_010909567.1|8.20E-68PREDICTED: cell number regulator 2-like [Elaeis guineensis]
Swissprottr|Q9LQU4|PCR2_ARATH3.00E-57Protein PLANT CADMIUM RESISTANCE 2
trEMBLtr|F2EC87|F2EC87_HORVD5.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_20023.1}
TAIRAT1G148709.00E-57PLANT CADMIUM RESISTANCE 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009311012261103774+
Transcript Sequence

Network for GWHGAAEX018292

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04749.16PLAC8541521.90E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.960
SRR2545915Juvenile tuber25.690
SRP108465SRR5643513five period of Gastrodia elata36.370
SRR5643514five period of Gastrodia elata21.160
SRR5643515five period of Gastrodia elata173.820
SRR5643524five period of Gastrodia elata37.080
SRR5643525five period of Gastrodia elata96.310
SRR5643528five period of Gastrodia elata205.710
SRR5643658five period of Gastrodia elata45.750
SRR5643659five period of Gastrodia elata158.690
SRR5643660five period of Gastrodia elata21.590
SRR5643661five period of Gastrodia elata102.300
SRR5643662five period of Gastrodia elata152.740
SRR5643663five period of Gastrodia elata67.560
SRR5643664five period of Gastrodia elata235.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1112.330
SRR6049655Rhizomagastrodiae_C368-T10_good_186.180
SRR6049656Rhizomagastrodiae_C368-T07_good_162.270
SRR6049657Rhizomagastrodiae_C368-T07_good_165.760
SRR6049658Rhizomagastrodiae_C368-T04_good_128.680
SRR6049659Rhizomagastrodiae_C368-T04_good_133.560
SRR6049660Rhizomagastrodiae_C368-T01_good_1118.440
SRR6049661Rhizomagastrodiae_C368-T04_good_140.580
SRR6049662Rhizomagastrodiae_C368-T01_good_130.560
SRR6049663Rhizomagastrodiae_C368-T01_good_171.110
SRR6049664Rhizomagastrodiae_C368-T10_good_166.500
SRR6049665Rhizomagastrodiae_C368-T10_good_166.500
SRP279888GastroGastrodia elata tuber 49.61
JuvenJuvenile tuber11.08
Mother_GastroMother tuber of Gastrodia elata 854.33
Mother_JuvenMother tuber of Juvenile 452.43