Detail information of GWHGAAEX018300/evm.TU.scaffold_92.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374317300|ref|YP_005063728.1|1.00E-37prephenate dehydrogenase [Sphaerochaeta pleomorpha str. Grapes]
KOGKOG23802.00E-118Prephenate dehydrogenase (NADP+)
nrgi|720074738|ref|XP_010279113.1|6.95E-162PREDICTED: arogenate dehydrogenase 2, chloroplastic-like [Nelumbo nucifera]
Swissprottr|Q9LMR3|TYRA2_ARATH5.00E-119Arogenate dehydrogenase 2, chloroplastic (Precursor)
trEMBLtr|W1PZP8|W1PZP8_AMBTC3.00E-156Uncharacterized protein {ECO:0000313|EMBL:ERN13893.1}
TAIRAT1G157102.00E-118prephenate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009317827411785297+
Transcript Sequence

Network for GWHGAAEX018300

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02153.16PDH963231.10E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15227TYRAAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Tryptophan metabolismmap00380

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006571Biological Processtyrosine biosynthetic process
GO:0004665Molecular Functionprephenate dehydrogenase (NADP+) activity
GO:0008977Molecular Functionprephenate dehydrogenase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.110
SRR2545915Juvenile tuber11.570
SRP108465SRR5643513five period of Gastrodia elata4.570
SRR5643514five period of Gastrodia elata12.250
SRR5643515five period of Gastrodia elata10.070
SRR5643524five period of Gastrodia elata27.560
SRR5643525five period of Gastrodia elata32.860
SRR5643528five period of Gastrodia elata291.830
SRR5643658five period of Gastrodia elata100.990
SRR5643659five period of Gastrodia elata6.500
SRR5643660five period of Gastrodia elata10.220
SRR5643661five period of Gastrodia elata7.060
SRR5643662five period of Gastrodia elata3.420
SRR5643663five period of Gastrodia elata1.770
SRR5643664five period of Gastrodia elata2.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.830
SRR6049655Rhizomagastrodiae_C368-T10_good_10.150
SRR6049656Rhizomagastrodiae_C368-T07_good_11.880
SRR6049657Rhizomagastrodiae_C368-T07_good_11.250
SRR6049658Rhizomagastrodiae_C368-T04_good_11.300
SRR6049659Rhizomagastrodiae_C368-T04_good_10.360
SRR6049660Rhizomagastrodiae_C368-T01_good_11.700
SRR6049661Rhizomagastrodiae_C368-T04_good_11.680
SRR6049662Rhizomagastrodiae_C368-T01_good_11.570
SRR6049663Rhizomagastrodiae_C368-T01_good_12.130
SRR6049664Rhizomagastrodiae_C368-T10_good_10.370
SRR6049665Rhizomagastrodiae_C368-T10_good_10.370
SRP279888GastroGastrodia elata tuber 10.60
JuvenJuvenile tuber2.21
Mother_GastroMother tuber of Gastrodia elata 50.10
Mother_JuvenMother tuber of Juvenile 41.97