Detail information of GWHGAAEX018302/evm.TU.scaffold_92.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27271.00E-175Rab3 GTPase-activating protein, non-catalytic subunit
nrgi|695014719|ref|XP_009394196.1|0PREDICTED: rab3 GTPase-activating protein non-catalytic subunit [Musa acuminata subsp. malaccensis]
trEMBLtr|E0CS91|E0CS91_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20190.3}
TAIRAT3G149101.00E-175Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009318264771837326-
Transcript Sequence

Network for GWHGAAEX018302

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14655.5RAB3GAP2_N294206.50E-96
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.620
SRR2545915Juvenile tuber8.170
SRP108465SRR5643513five period of Gastrodia elata9.050
SRR5643514five period of Gastrodia elata8.750
SRR5643515five period of Gastrodia elata7.870
SRR5643524five period of Gastrodia elata8.990
SRR5643525five period of Gastrodia elata13.320
SRR5643528five period of Gastrodia elata11.730
SRR5643658five period of Gastrodia elata13.250
SRR5643659five period of Gastrodia elata7.020
SRR5643660five period of Gastrodia elata7.180
SRR5643661five period of Gastrodia elata6.210
SRR5643662five period of Gastrodia elata6.210
SRR5643663five period of Gastrodia elata6.420
SRR5643664five period of Gastrodia elata6.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.980
SRR6049655Rhizomagastrodiae_C368-T10_good_110.020
SRR6049656Rhizomagastrodiae_C368-T07_good_110.810
SRR6049657Rhizomagastrodiae_C368-T07_good_18.580
SRR6049658Rhizomagastrodiae_C368-T04_good_110.750
SRR6049659Rhizomagastrodiae_C368-T04_good_112.040
SRR6049660Rhizomagastrodiae_C368-T01_good_19.500
SRR6049661Rhizomagastrodiae_C368-T04_good_19.960
SRR6049662Rhizomagastrodiae_C368-T01_good_111.040
SRR6049663Rhizomagastrodiae_C368-T01_good_19.960
SRR6049664Rhizomagastrodiae_C368-T10_good_19.690
SRR6049665Rhizomagastrodiae_C368-T10_good_19.690
SRP279888GastroGastrodia elata tuber 8.32
JuvenJuvenile tuber11.89
Mother_GastroMother tuber of Gastrodia elata 13.49
Mother_JuvenMother tuber of Juvenile 14.02