Detail information of GWHGAAEX018303/evm.TU.scaffold_92.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194336180|ref|YP_002017974.1|4.00E-28serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1]
KOGKOG11870Serine/threonine protein kinase
nrgi|695046274|ref|XP_009410960.1|0PREDICTED: probable receptor-like protein kinase At2g42960 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SJG2|Y2296_ARATH0Probable receptor-like protein kinase At2g42960
trEMBLtr|Q337H2|Q337H2_ORYSJ0cDNA clone:J033116G17, full insert sequence {ECO:0000313|EMBL:BAG95829.1}
TAIRAT2G429600Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009318818631919388+
Transcript Sequence

Network for GWHGAAEX018303

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1754423.00E-48
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-V

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.940
SRR2545915Juvenile tuber7.840
SRP108465SRR5643513five period of Gastrodia elata11.590
SRR5643514five period of Gastrodia elata13.250
SRR5643515five period of Gastrodia elata11.750
SRR5643524five period of Gastrodia elata14.070
SRR5643525five period of Gastrodia elata21.240
SRR5643528five period of Gastrodia elata14.410
SRR5643658five period of Gastrodia elata28.110
SRR5643659five period of Gastrodia elata5.910
SRR5643660five period of Gastrodia elata5.020
SRR5643661five period of Gastrodia elata5.410
SRR5643662five period of Gastrodia elata6.320
SRR5643663five period of Gastrodia elata9.280
SRR5643664five period of Gastrodia elata6.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.290
SRR6049655Rhizomagastrodiae_C368-T10_good_112.360
SRR6049656Rhizomagastrodiae_C368-T07_good_112.810
SRR6049657Rhizomagastrodiae_C368-T07_good_110.290
SRR6049658Rhizomagastrodiae_C368-T04_good_19.320
SRR6049659Rhizomagastrodiae_C368-T04_good_18.220
SRR6049660Rhizomagastrodiae_C368-T01_good_19.950
SRR6049661Rhizomagastrodiae_C368-T04_good_111.890
SRR6049662Rhizomagastrodiae_C368-T01_good_115.690
SRR6049663Rhizomagastrodiae_C368-T01_good_111.220
SRR6049664Rhizomagastrodiae_C368-T10_good_115.300
SRR6049665Rhizomagastrodiae_C368-T10_good_115.300
SRP279888GastroGastrodia elata tuber 6.26
JuvenJuvenile tuber8.06
Mother_GastroMother tuber of Gastrodia elata 5.89
Mother_JuvenMother tuber of Juvenile 7.08