Gene detail

Detail information of GWHGAAEX018305/evm.TU.scaffold_92.54

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743758317\|ref\|XP_010926172.1\|	1.06E-31	PREDICTED: uncharacterized protein LOC105048538 [Elaeis guineensis]
trEMBL	tr\|F6I0L7\|F6I0L7_VITVI	3.00E-20	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60483.1}
TAIR	AT5G66440	3.00E-18	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	2003871	2005496	-

Transcript Sequence
>GWHTAAEX018305 CAAAATGATAGATCGATCGCGCTTGTATGTCGGGAACACGTTGGTCATGATGCTAGGAGCTGTTAGAGAATGTACTGCTTCTAACACTGCTGAAAGTGGTCACATGGAGCTGGATGTGTGCTGGAGTGCATTGCTTGGGTGATAGAGAAGGACAGGGTCTGAGGAATAGCTATGAACTATTAAATTATTTAGGAGGCGACCAATGGTAGTCACAACAATTAATACTCTCCGGATGATGATTATGTTTCTTAAACCTTTTTGCTCGTATCTTCTAAAGCCCGTTAGGAGAATCACAAGAAAGCTGATCAACTTGTTAAGAAAGAAAAAACTAAAGTCACAAATTAGAAAAACGATAGTATTAAAAAGGTTTGTCGAAATTTCAATAAAAAATTTTATTAAGATTAAACAGCCAGCAATTAAAATAAATATATGATTAATAAGAAATTTAAACTAAATAATTCAATTATAAAGTCCCAACTCCCAACATAATAGCGAACAAAATTAAGCAACAGATAATTATCTTGTTAAATTTCGGCGGTAATCCGACTAGGCGATTCGTCGCTATAAAAGGCGTTCTGACTGGCTGCATTGGAAGGAAACTCATCGGAATCAGATTGTCCGCGCCTGGGCTTGCAACGACGCATCTTCTTCTTCATTCGGAACCCCAAAGTCTGCAGAGATGGGCGCATTCAAGGCGGAGAAGGAAAAGCGGCGATTCCGACGCCTGCGGCAGATTGGGCGGCTGCTGCGCTGCATCGAAGCCTCCGCAGCCATCCTCCTTCTCTCCTATTTCTCCGACCACATTTCGGCAGCCGCACAGAGCTCCGGCATATTCCTCCGCCGCGCAACCGCTTTTCTCATCGACCCCCGTTTCGTCTTTCTCCTGGGAAACGCGATCGTCCTCGTCCTGCTCAAATCCCTCCGCATATCATCCCAAATTTCAACGATGAGCGGGCAGATTCCTTCGATCCCTCCAGTTCTTATGTCTGAAGCGGCGGAAGCGGAAGCGGCGGAAGCGGCTGAAGCGGAAGCGGCGGAAGTGGAAGCGGCGGCGGAGGAGGAGGTTAAGCCGAAGAAGGCGGCCTGCCGGCGGTGCCGGTACGAGAAATTCGCCCGGCGGCGCCCGCAAGCCAAGCTCCGGCGAGCTGAGACGGATTGCGCTCGCAAAGGGCTGAACACTCCGTCTGCGCAGGAGGAAGAGGCCGACGCCGAGGAATTTCGCCGCAGGATAGACGACTTCATCGCCAAGCATCGCCGCTTTCGACGGGAGGAATCACTTGCCATCGTAGCTCTTTGACTTGGACCGGCCGGAACGGACCGGACCGGGCCGAACTGATGAACCTGTTGTACCTTTTGTAAAACAAAACCAAGCATCTAAATCGGGGTGGTGGTTTAAAGCTTTCCTCCACTTTTACTGTACATTGTGTTGCCCTTCTACCTGTATTTTCAAATTGATTGTATATATCCATTTTCTTAAAAAAAGTTCACACATGATGGAGAGAATATGTAAAATATAGCTGTAAGATTTTACATAGATTATGAGAAAGTGGTTGAATGTAAATTAATGTGATGTATATACAACTCTTGATTTGCAATATGGTTTAGAAAAGGATTTTTTAAATTCTT

Network for GWHGAAEX018305

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.650
SRP064423	SRR2545915	Juvenile tuber	1.410
SRP108465	SRR5643513	five period of Gastrodia elata	0.850
	SRR5643514	five period of Gastrodia elata	4.770
	SRR5643515	five period of Gastrodia elata	2.510
	SRR5643524	five period of Gastrodia elata	3.100
	SRR5643525	five period of Gastrodia elata	183.830
	SRR5643528	five period of Gastrodia elata	61.510
	SRR5643658	five period of Gastrodia elata	90.040
	SRR5643659	five period of Gastrodia elata	3.710
	SRR5643660	five period of Gastrodia elata	2.350
	SRR5643661	five period of Gastrodia elata	5.430
	SRR5643662	five period of Gastrodia elata	6.260
	SRR5643663	five period of Gastrodia elata	4.390
	SRR5643664	five period of Gastrodia elata	9.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.300
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.550
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.610
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.610
SRP279888	Gastro	Gastrodia elata tuber	13.51
	Juven	Juvenile tuber	1.09
	Mother_Gastro	Mother tuber of Gastrodia elata	26.69
	Mother_Juven	Mother tuber of Juvenile	12.56