Detail information of GWHGAAEX018306/evm.TU.scaffold_92.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479128675|ref|YP_005068635.1|0glucose-1-phosphate adenylyltransferase [Arthrospira platensis NIES-39]
KOGKOG13220GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase
nrgi|672161745|ref|XP_008800701.1|0PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1-like isoform X1 [Phoenix dactylifera]
Swissprottr|P55233|GLGL1_BETVU0Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Precursor)
trEMBLtr|A0A088SGI3|A0A088SGI3_9ASPA0AGPL1 protein {ECO:0000313|EMBL:AIO11223.1}
TAIRAT1G276800ADPGLC-PPase large subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009322586392276823+
Transcript Sequence

Network for GWHGAAEX018306

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.22NTP_transferase933696.80E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00975glgC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0005978Biological Processglycogen biosynthetic process
GO:0016779Molecular Functionnucleotidyltransferase activity
GO:0008878Molecular Functionglucose-1-phosphate adenylyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.110
SRR2545915Juvenile tuber76.110
SRP108465SRR5643513five period of Gastrodia elata96.110
SRR5643514five period of Gastrodia elata169.870
SRR5643515five period of Gastrodia elata104.100
SRR5643524five period of Gastrodia elata150.260
SRR5643525five period of Gastrodia elata47.060
SRR5643528five period of Gastrodia elata12.990
SRR5643658five period of Gastrodia elata9.630
SRR5643659five period of Gastrodia elata137.500
SRR5643660five period of Gastrodia elata63.930
SRR5643661five period of Gastrodia elata96.820
SRR5643662five period of Gastrodia elata227.420
SRR5643663five period of Gastrodia elata161.870
SRR5643664five period of Gastrodia elata126.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1229.070
SRR6049655Rhizomagastrodiae_C368-T10_good_1185.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1262.090
SRR6049657Rhizomagastrodiae_C368-T07_good_1132.620
SRR6049658Rhizomagastrodiae_C368-T04_good_1205.940
SRR6049659Rhizomagastrodiae_C368-T04_good_1137.420
SRR6049660Rhizomagastrodiae_C368-T01_good_189.750
SRR6049661Rhizomagastrodiae_C368-T04_good_1243.040
SRR6049662Rhizomagastrodiae_C368-T01_good_1428.430
SRR6049663Rhizomagastrodiae_C368-T01_good_1209.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1274.330
SRR6049665Rhizomagastrodiae_C368-T10_good_1274.330
SRP279888GastroGastrodia elata tuber 177.04
JuvenJuvenile tuber94.98
Mother_GastroMother tuber of Gastrodia elata 16.77
Mother_JuvenMother tuber of Juvenile 22.96