Detail information of GWHGAAEX018319/evm.TU.scaffold_92.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20382.00E-07CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein
nrgi|720018226|ref|XP_010261717.1|2.50E-13PREDICTED: CCAAT/enhancer-binding protein zeta isoform X2 [Nelumbo nucifera]
trEMBLtr|A0A068TR17|A0A068TR17_COFCA4.00E-13Coffea canephora
TAIRAT1G724402.00E-07CCAAT-binding factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009327917922792217-
Transcript Sequence

Network for GWHGAAEX018319

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.690
SRR2545915Juvenile tuber4.500
SRP108465SRR5643513five period of Gastrodia elata2.750
SRR5643514five period of Gastrodia elata2.110
SRR5643515five period of Gastrodia elata3.510
SRR5643524five period of Gastrodia elata2.200
SRR5643525five period of Gastrodia elata1.620
SRR5643528five period of Gastrodia elata4.580
SRR5643658five period of Gastrodia elata2.130
SRR5643659five period of Gastrodia elata3.020
SRR5643660five period of Gastrodia elata3.980
SRR5643661five period of Gastrodia elata0.310
SRR5643662five period of Gastrodia elata2.520
SRR5643663five period of Gastrodia elata2.800
SRR5643664five period of Gastrodia elata1.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.170
SRR6049655Rhizomagastrodiae_C368-T10_good_10.450
SRR6049656Rhizomagastrodiae_C368-T07_good_12.310
SRR6049657Rhizomagastrodiae_C368-T07_good_11.760
SRR6049658Rhizomagastrodiae_C368-T04_good_10.710
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.630
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.580
SRR6049663Rhizomagastrodiae_C368-T01_good_10.570
SRR6049664Rhizomagastrodiae_C368-T10_good_13.020
SRR6049665Rhizomagastrodiae_C368-T10_good_13.020
SRP279888GastroGastrodia elata tuber 0.90
JuvenJuvenile tuber1.54
Mother_GastroMother tuber of Gastrodia elata 1.46
Mother_JuvenMother tuber of Juvenile 2.65