Gene detail

Detail information of GWHGAAEX018321/evm.TU.scaffold_92.81

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434398854\|ref\|YP_007132858.1\|	5.00E-41	folate/biopterin transporter [Stanieria cyanosphaera PCC 7437]
nr	gi\|743826188\|ref\|XP_010933216.1\|	0	PREDICTED: probable folate-biopterin transporter 9, chloroplastic isoform X1 [Elaeis guineensis]
Swissprot	tr\|O22780\|FBT9_ARATH	3.00E-149	Probable folate-biopterin transporter 9, chloroplastic (Precursor)
trEMBL	tr\|M0RW13\|M0RW13_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P01050_001}
TAIR	AT1G04570	1.00E-129	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	2798027	2817287	+

Transcript Sequence
>GWHTAAEX018321 ATGACCTGTCCCTCTGCACTAATAACTTCTTCTCTTAATCCCTTGATTAAGAACCTCAATCCCACCACGTATTTCTCCTCACCTCTGCATCCAAATCTCTCCATCCAATCCAATCCCAGCAATGGTAGACGAAAGGAGACACCTCTGAGGAAAAGCCACGTTTTGAAACCCGTTGTGATTCCTTCCCCCGTGAAGAGGGTTGGAGGCGACAGAAGAGAATCAAGCCAAGGAGAAATCGGGCTTCAAATGTGGACATTGTGTGGTTTTGGGTTTTGGGTTCAAGGATTCAGATGTTTTCCTTGGCTGGCGCTTAATTTTCACATGAGCAATGGGCTTGGATTAAGTCCTTCGATCCTACAGCTCGTGCAGAGCACCGGGAGCTTGCCAATGATTGCAAAGCCACTCTTTGGGTTCATCTCTGATGCAGTTTACATTGGAGGGGATCACCGGCTTCCATATATTTCCATTGGAGCCTTCTTGCAGGCTCTTTCCTGGGGAACACTGGCATTACTTCCAGCACATGCTGGAACATTTTCCACTCAAATGGTTTGCATCTTGCTTAGCAATCTCGGGGCATCTGTTGTTGAAGTCATTGGTGACGCTTTTGTTGCTGAATTCAGCAAGACGAGAAAGGCGGGAGAACTTCAGTCTTATGCATTCACCGCTATGGCTGCTGGGGCCCTCTTAGGCAACCTCTTAGGCGGCTTTCTTCTCTTAAAACTCCCCAAGGCAAACACTATGTTCTTCATATTTTCTATCTTACTCGCAATCCAATTGGTGCTTTCCTTGACCACAAAAGAAATCTCTTTTCATAAAGCACAAGCCTCAATTCATCATCTTCCTCCGAAGAACTCCTTGAAAGAAACCCTCAGCAAGCAGTTTGATGACCTTATGGCTGTGATTACAGATGCAAGGATTCTATACCCTCTTCTCTGGATTGTGTCTTCCAATGCAGTTGTCCCGCTTCTCTCAGGAACTCTCTTCTGTTTTCAAACTCAGTGCCTAAACCTCGACCCCTCGGTGATCGGGTTATCGAAAGTGATGGGGCAGCTTATAGTCTTATGCACCACCCTGCTATACAATCAGCATTTGAAGAATTTTCCAATGAGGAGGCTCATATCTGTGGTCCAGATTGTCCATGCTCTTTCATTTCTTTTCGACTTATTTTTAGTGAAACAAGTCAATGTGAGATTGGGCATATCGAATGAAGTGTACGTACTATGTATTTCTTCTCTGGCTGAAGCTCTTGCTCAGTTCAAGACATTGCCTTTCACTGTTCTCTTCTCAAGGCTTTGCCCTTTGGGTTGTGAGGGCTCTCTCTTCGCCTTCTTTGCCTCAGCTATGTGCTTTTCATCTATAGTGAGCGGTTTGTTTGGAGTTGGATTAGCTTTTTTTTTGGGAGTGTCATCGGAGAACTATTCAAGTTTGCCTTTGGGCATAGCTCTGCAGGTTGTAGCTGCGTTTCTGCCATTAGGATGGATAACTCATGTTCCTATGATGATGAATTTGGAGCTGAAGAAGAAGGCCATAAGGCATAAGATAAGAGGATGTGGTGTTTCTTTGATCAGCTCTTCAAGCTCTGAAGAGCAACACTTGCCCTTTGCTCCATAA

Network for GWHGAAEX018321

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03092.15	BT1	94	261	5.90E-38
PF03092.15	BT1	321	512	1.10E-41

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.140
SRP064423	SRR2545915	Juvenile tuber	10.860
SRP108465	SRR5643513	five period of Gastrodia elata	3.580
	SRR5643514	five period of Gastrodia elata	2.000
	SRR5643515	five period of Gastrodia elata	1.650
	SRR5643524	five period of Gastrodia elata	1.840
	SRR5643525	five period of Gastrodia elata	0.150
	SRR5643528	five period of Gastrodia elata	0.510
	SRR5643658	five period of Gastrodia elata	0.380
	SRR5643659	five period of Gastrodia elata	4.410
	SRR5643660	five period of Gastrodia elata	4.490
	SRR5643661	five period of Gastrodia elata	3.930
	SRR5643662	five period of Gastrodia elata	3.810
	SRR5643663	five period of Gastrodia elata	2.650
	SRR5643664	five period of Gastrodia elata	2.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.680
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.960
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.460
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.690
SRP279888	Gastro	Gastrodia elata tuber	3.23
	Juven	Juvenile tuber	6.26
	Mother_Gastro	Mother tuber of Gastrodia elata	1.92
	Mother_Juven	Mother tuber of Juvenile	2.28