Gene detail

Detail information of GWHGAAEX018322/evm.TU.scaffold_92.82

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	2817464	2823068	+

Transcript Sequence
>GWHTAAEX018322 ATGCCAAAGTCCGTGCGATATGTACTCGATCAGATACTGTACGCACTTTGCAAGTATGGATGCACTCGGGATAGTAAAAGTGTAGGAGTATTTAATATAGACGAGCATCTGCCCTCGTTCTTTCTCCGCATACTGTTGTCTCCTCTCGTTCCTTCTCCGCCTCATCCCTTTTTCTCCTCCTTTCCTTCTCCGCCTCTGCCCTATTTCTCCGTCGGCCGCTTGCGCTTAGGGCTTCTTCGAAGCTTCGGGCATCCCAAAATCTGTTCGCTGCTCGCTTCGGGCATTTTCTCCGCCGGTCGCTCGCGCTTAGGGCATCTTCGAAGCTTCAACCGTCGGTGCTTCAAGACCCTCACTGCTTCAAGACCGTCGTTGCTTCAAGGCCCTCACTGCTTCAAGACCGGCGAAATTCCTTCGTCGGCCTTCTCCACCACTCGAAACCCTAATTTCCGACCCAAGTGCCAGAACAAAAGCCGAGAGCCCAGAGTCTGCGACTTTCGATTTCTTCACCCCAATCGATCAACCATCGGCATTTTTTCGTCAGCGCTCATCTCTACAGCCGCATCAGTTCTGCTCAATTTGTTCCGAGAGCTGTGATTTTCTAAGCCGTTCGTTTCCTTCTTTTAGTGCAAGCTTTCAATATTCTTATGAATTTACTTCATACAGCTGCCTAGTTTTAACGATTATGTACAGAGATCAAACGGTAATGAGCTTCTAATGTGTGCTGATTTGATTAAGAATTTTTTTTGCTTTATTTCTTATAATCAAACATTTTTATTCGGTTATTTAGATATTAACTTATAAAGATGGTTTCTATTAGTGAAAAAAAGTTATACCGGGAAAAATGTGAGAAAAATCATAGTTCAGGAAAAAAAAATCTTAGGAAGAGGATGCTATTTGATTGAGTGTAATAATTAAGGATTAATGTACCTAACCTCATTAGTGGAACAAAGGTTTAGTGGTATGATGGTGATTGTACCAAGCCTCATTTAGTGGAACAAAGGTTTAGTGGTATGAACAGGATTTTTGAAGCTTGGGTTATGTTTCCTTCGATCATAATAAGCAACAGCACATAGATTAACAATTCATATGCAGATGGTCTTAGTTTTTAGTTCATTCTATTCAAGTGATGCTGTTTGATGGAAACTTTGGCTTAACTTGCATTGAATAGCTTGATTACATGAAAAAGGATCTTACATACTTAAAAAAAGAGCAAATTCATTTATTTATATATTTTAATACTCTTCCAACGGTCGACGGGTTTCCAAATCGCGGGCGCCATCCGAGCCGTCCGTTCCGCGGGATTTGATCTAACGGCTCGCGCCTTCGATCGGACCTGTTTAATCTCGACCGTTCCGCGGTTCTGAGATTTAATCCTGCGGCGCCAAATGCACTCGCCGCAAGTATCCCCGATCCGCCGTTAGATCATCCGATCTAATCCAACGGTCGATCTCTTATTTGCGGTTCTTCGTTACGTATCGGGAGATCAGGGCCGTTCCGCCCCGACGGTCGATCAATCAGACGGTCTGGAGCATCCCGAGCGCTGTGGATCTTCGTCTTCCCCTCGACTTGTCTGCGTCTGGTCCCCCCCGATAGCCAAGATCTCCTCAGCCGCGTGGCAGTACGGGGAAAGCTCCGAAATTCCTCTCCTGCCCTCGGTGCGTTCACCTTGCTGGCTGCCTTCTTCCCAATTTGCCCATAGCCGTTGGCCCGAGCCATTCCCTTCGGCCCAAGCCTCGTTGCCTTTGCCAAGCTCTGAAAATCACACCCAGAGCTCCCTCAGGCCTATAAATACCCCCAGTGATTCACAGTGAGTCCCTTTGATCACTGTGAACCCTCAATTTCCCCAGTTGAAGTCTCTGGAGCTTCCGTCTACCTCGGCGAATCCCGGCATTTCTGAAGTTTCAACAGCTGATAGAGGGCCCGTCTGGTGTTCAGACCCACTGTGAAGCTTCGTCTGCTGTCCAAGAAGCTTCAGCGCACCTCAATTTTCCTCGGCCAAGCCTGCAGCCCCACTTGAGGTACCACCATCCCCCATTGAAATTTCTTCAGCTCATTTCCATTATGTCTTCTGGATTGAGCCCTGGATGTCGTCTAAAGCACCTTAGCCAACTAGGAAACCTGTGGTGATTGTCGCCTGGAGCTAAGTTAGCTCGAGTCGATCGTATCGATCGACTAAGCTAGCAGCCGAGCCAATGGCTGAGTCCGAGTAAGGACCTAGTGATTGGATGCGCCCCAGGTTAAGATAGGTTGGGGGTTCGATGCGTCTCGACTCCCCGAACCTGTAGGGATTGAACCCCGATCGAATCGAGGCCTCTGTGAGGAGAATTGTCCCCTCACAGTCGGCCGGAGACGCCTTATTGAAGGCGTCTCGGTCGAGTAGCACCCCATCGATCCAGAGGGATCCAGATGGGGGTTCTTGGACCAGTCGATGCGTCTCGACTCCCTGAACGTGTAGGGATTAATTTGAGCCGCTGCCATTGCCGGAGTGCCGGGAATTTTGCTGCGGAAGTCTGGCTGACTCAGGACCCGTCGAGAGGAGGAAGATGAAGTCGTGGGTCCTGGGCTGGTGCAACGACCCCAATAATTGGATAGGAGATTAATCCAAATATTGGAATGTTATCTTAACACCCAACACTCGATTAGGAGAAAGCAAATCAAGTGTAGATGCTAAGTGGCCAAGTCACTTTATGAGTAGTTGTTAAGTTAAAATAAATTTATACAATTTGAATGCAATCAGAAATACATGATAAGGAGATACATGTAGATACAACATTGCAGTTAATTCTAACACAAGCAATTTGAATAATCCACTCATTCATCCCAAACAG

Network for GWHGAAEX018322

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.580
SRP064423	SRR2545915	Juvenile tuber	3.110
SRP108465	SRR5643513	five period of Gastrodia elata	2.180
	SRR5643514	five period of Gastrodia elata	2.740
	SRR5643515	five period of Gastrodia elata	3.310
	SRR5643524	five period of Gastrodia elata	2.260
	SRR5643525	five period of Gastrodia elata	2.430
	SRR5643528	five period of Gastrodia elata	1.680
	SRR5643658	five period of Gastrodia elata	0.820
	SRR5643659	five period of Gastrodia elata	5.400
	SRR5643660	five period of Gastrodia elata	0.020
	SRR5643661	five period of Gastrodia elata	6.030
	SRR5643662	five period of Gastrodia elata	5.870
	SRR5643663	five period of Gastrodia elata	10.410
	SRR5643664	five period of Gastrodia elata	8.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.500
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.420
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.010
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.010
SRP279888	Gastro	Gastrodia elata tuber	4.02
	Juven	Juvenile tuber	1.84
	Mother_Gastro	Mother tuber of Gastrodia elata	1.67
	Mother_Juven	Mother tuber of Juvenile	0.88