Gene detail

Detail information of GWHGAAEX018324/evm.TU.scaffold_92.84

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0916	1,3-beta-glucan synthase/callose synthase catalytic subunit
nr	gi\|743882654\|ref\|XP_010909209.1\|	PREDICTED: callose synthase 9 [Elaeis guineensis]
Swissprot	tr\|Q9SFU6\|CALS9_ARATH	Callose synthase 9
trEMBL	tr\|A0A067LAZ7\|A0A067LAZ7_JATCU	Uncharacterized protein {ECO:0000313\|EMBL:KDP44403.1}
TAIR	AT3G07160	glucan synthase-like 10

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	2901630	2986686	+

Transcript Sequence
>GWHTAAEX018324 ATGATGTTCCAGGGATTAACTATCATTGCATTTAATAAAGGGCATTTAAATTTGAAAACATGGAAACAGCTACTCAGTCTTGGTCCTACATATTCTGTAATGAAGTTCACTGAAAGTATCCTTGACATTGTTATGATGTATGGTGCATACTCTACATCTCGTCGTTCTGCCGTCACTCGTGTCATTTGCCGCTTTCTTTGGTTTGCGCTTGTTTCACTTCTTATAAGCTATCTTTTTATTAAGGCACTCCAGGATGGGTCGGATTCGTTATTGTTCAAGATATATGTCCTTGTAGTTGCTATATATGCTTCTTTTAGAGTTTTTCTGAGCTTGTTCACCCGGATCCCATCTTGCCACCGACTTATACAACCATGTCATCAGTGGTTTGTAATACGTCTTCTTAATTGGATGCACCAGGAGCATAACTTTGTTGGTCGTGGGATGTATGAGAGGACAACTGACTATATTAAGTACTTGTTATTTTGGCTTGTGGTACTAGGTGGAAAGTTCTCCTTCGCGTACTTTCTTTTGATCAAACCATTGGTATCGCCTACACAAATTATAGTAAATTTTAATAACATGAGCTACTCGTGGCATGATTTTGTGTCCAAACATAATCATAACGCTCTTACAATTCTCAGTTTATGGGCGCCTGTATTTTGTATCTATCTGTTAGATATCCAGCTGTTCTACACTGTTTTTTCATCTGTATATGGTTTCCTTCTCGGGGCAAGAGACCGTTTAGGCGAGATCAGATCTGTGGATGCAGTTCATAAACTTTTTGAGGAATTTCCTTCAGCATATATGGAGAAGCTTCACTTTCCTTTGCCTAGAAGGAGGGAATTGATTTCTTCTGGCCAGGTTGAAGAGCTCAAAAAGTTTGACGCTGCTAGATTTGCTCCATTCTGGAATGAAATTGTTAAAAATTTGCGAGAAGAAGACTATATATCCGACTTGGAATTGGATTTGCTTCTGATGCCAAAAAATTATACATTTATTCCTCTTGTACAATGGCCTTTATTTCTTCTTTCTAGCAAGGTTTTTATGGCCAAGGATATTGCAGTAGAAAGCAAGGATTCCCAAGATGAACTATGGGATAGAACTTCTAGGGATGAATACATGAAGTACGCTGTTGAGGAGTGTTTTTACAGTGTTAGAGCAATATTGATGGCCATACTCGAATTTGATAAAGAAGGCTGCTTGTGGGTGGACAGAATTTTTGAAGATATAAAGGAGAGTATTAGGAGGAAAAATATTTTGGCCGACTATCAATTAAGCAAACTGCAGCTTGTGATTTCCAGGATTACTGCATTGGCTGGAATATTGAAAGGAGAAGAATCTCCTGAACTTGAAAAGGGGGCAGTTAATGCTATGCAAGATCTTTATGATGTTGTGCATCATGATATTCTTTTTGTGGATATGGGAGGCAATCTTGATATATGGAATCGAATATCTAAAGCAAGGGCTGATGGCCGGCTTTTCTCTTATCTTAAATGGCCTGGAGACCCCGAGCTGAAAGCACAGATCAAACGATTGCATTCACTGTTGACCATCAAAGAGTCTGCTGCAAATGTGCCTATAAACCTTGAGGCTAGGCGTCGACTTGAGTTCTTTATGAACTCACTGTTTATGCGAATGCCAGCTGCTAGGCCTGTCTCAGAGATGTTGTCATTCAGTGTCTTTACCCCATATTATTCTGAAACTGTGCTTTATAGTATGAACGAACTCCAAAAGAAGAACGAGGATGGGATAACCACTCTGTTCTATCTTCAGAAGATATTTCCAGATGAATGGAAGAATTTTCTTTCTCGAATTGGGAGAAATGAAAATGCTGCTGATTCTGAGCTTTTCGACAGCCCAAATGATATTCTTGAGCTCCGATTTTGGGCTTCTTATCGTGGACAAACACTAGCTCGCACTGTTCGAGGTATGATGTATTATAGGAAGGCTCTAATGCTTCAAAGCTATTTGGAGAGGCTTAGCTTTGAAGGCTCAGAAACTACATTTAGTAGCAGTTTCTTAAGTGAAACTCAGGGTTTTGATTTATCTCCTGAGGCTCGTGCACAAGCAGATATTAAGTTTACATATGTTATAACATGTCAAATTTATGGCAAACAAAGGGAAGAACAGAAGCCTGAGGCTGCAGATATTGCATTGTTGATGCAACGGAATGAAGCACTTAGAGTTGCATACATTGATGCTGTTGAGAATCTAAAGGATGGTAATGCATACACTGAGTATTTTTCAAAACTTGTCAAAGCTGATATCCATGGGAAGGATAAGGAAGTATATTCAATAAAATTGCCTGGCAATCCAAAGCTTGGCGAAGGTAAGCCTGAAAACCAAAACCATGCGATTGTGTTTACTCGTGGCAGTGCAATGCAAACTATAGACATGAATCAGGATAATTATTTTGAAGAAGCCTTGAAAATGAGGAATCTTCTAGAAGAGTTTCATTGCAATCATGGCCTTCGTCAACCAACAATATTAGGTGTTAGGGAGCATGTCTTCACTGGAAGTGTTTCATCATTAGCTTCGTTCATGTCCAATCAAGAGACCAGCTTTGTGACTTTGGGTCAGCGCGTTCTTGCCAATCCACTTAAGGTCCGTATGCACTATGGTCACCCTGATGTTTTTGATAGAATTTTTCACATAACAAGGGGAGGTATTAGCAAGGCTTCACGTATAATAAACATTAGTGAGGATATATATGCTGGATTCAACTCAACTTTGCGTCAAGGGAATATTACTCATCATGAGTATATTCAGGTTGGGAAAGGAAGAGATGTTGGTTTGAATCAGATTGCATTATTTGAAGGAAAAGTTGCAGGTGGTAATGGTGAACAAGTTCTAAGCAGGGATGTTTACAGACTTGGGCAGCTCTTTGATTTCTTCCGTATGATGTCCTTTTATTTTACAACTGTTGGATATTACTTCTGCACCATGCTTACTGTATTAACGGTCTACGCATTTCTCTATGGGAAAGCATATCTGGCTTTATCTGGTGTTGGTGAGACCATTCAGAATAGAGCTGATATATTGGACAACACTGCCTTAAATGCTGCACTGAACGCACAGTTCTTATTTCAAATTGGTGTTTTTTCTGCTGTTCCTATGGTTATGGGATTCATATTGGAGCAAGGCTTTCTAAGAGCTATTATCAGCTTTGTTACAATGCAAATGCAGCTTTGCTCCGTCTTTTTCACATTCTCACTGGGAACAAGAACTCACTACTTTGGGCGGACAATACTCCATGGGGGTGCAAAGTATCGCGCAACTGGTAGGGGCTTCGTTGTCCGTCATATAATGTTTGCAGAGAATTACAGGCTATATTCACGCAGTCACTTTGTGAAGGGATTGGAAGTTGTACTTTTGTTGATTGTATACCTTGCATATGGTTATAATAAGGGTGGTGCCCTCTCTTACATTCTACTCTCTATTAGTAGCTGGTTCATGGCATTATCTTGGCTTTTTGCGCCATATGCATTTAATCCATCTGGCTTTGAATGGCAAAAAACTGTGGAAGATTTTCGAGACTGGACAAATTGGCTGTTTTATCGGGGTGGCATTGGAGTTAAAGGTGAAGAGAGTTGGGAGGCTTGGTGGGATGAAGAATTGGCCCATATTCGCACACTGCGTGGAAGAATTTTAGAAACTATACTGAGCTTAAGATTTTTTATCTTTCAGTATGGTATTGTGTACAAGCTTCATCTTTCCGGAAAGGATACATCGCTGACGGTTTATGCGTTGTCGTGGATTGTGCTGGCAGGCTTGTTCCTTCTTTTCCAGGTGTTCACAGTGAGCCAAAAGGCCACTGTCAATTTCCAGTTGCTGCTGCGCCTCGTGCAGAGCATCTTTTTCTTGTTGATTTTAGTGGGTCTTGTTGCTGCGGTTGTGCTTACTAATCTGTCACTGGCAGACATCTTTGCTTGCATTTTAGCATTTATACCAACAGGATGGGCGATTCTTTCTATTGCTGTTGCATGGAAGCCTGTGATGAAGAGATTGCATTTGTGGAAGTCACTAAGGTCTCTTGCTCGGCTCTATGATGCTGGAATGGGAATGTTCATTTTCATTCCCATTGCCATTTTTTCATGGTTCCCTTTCGTTTCCACTTTCCAAACTCGCCTTCTCTTCAATCAGGCATTCAGCAGAGGTTTAGAAATCTCCCTTATCCTCGCAGGAAACAATCCCAATACTGGCATCTGACAACTATATATGCTTTTAAGATGAGAGATAAATTTAATAGATTGTGAGTGATTTTTTTCTTCTTCACTGTATATTGCTTTGATGTGCTGAGGTAGTGATGTAATACTAATTCATTGAAATAACTGAAATATAATCATTCTGTGCTATATAGTTGTTATTATCAAAATAGGTTAATTATGAACTGCTAAGTTTCTGCACACTTTTTGTACTGTTTTGTTGGCAGTTGCTTTTAAAAAGGGTTTTGTTGTGGGGCCTATT

Network for GWHGAAEX018324

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02364.14	Glucan_synthase	525	1304	3.20E-237

Protein Sequence

>GWHPAAEX018324
MMFQGLTIIAFNKGHLNLKTWKQLLSLGPTYSVMKFTESILDIVMMYGAYSTSRRSAVTRVICRFLWFALVSLLISYLFIKALQDGSDSLLFKIYVLVVAIYASFRVFLSLFTRIPSCHRLIQPCHQWFVIRLLNWMHQEHNFVGRGMYERTTDYIKYLLFWLVVLGGKFSFAYFLLIKPLVSPTQIIVNFNNMSYSWHDFVSKHNHNALTILSLWAPVFCIYLLDIQLFYTVFSSVYGFLLGARDRLGEIRSVDAVHKLFEEFPSAYMEKLHFPLPRRRELISSGQVEELKKFDAARFAPFWNEIVKNLREEDYISDLELDLLLMPKNYTFIPLVQWPLFLLSSKVFMAKDIAVESKDSQDELWDRTSRDEYMKYAVEECFYSVRAILMAILEFDKEGCLWVDRIFEDIKESIRRKNILADYQLSKLQLVISRITALAGILKGEESPELEKGAVNAMQDLYDVVHHDILFVDMGGNLDIWNRISKARADGRLFSYLKWPGDPELKAQIKRLHSLLTIKESAANVPINLEARRRLEFFMNSLFMRMPAARPVSEMLSFSVFTPYYSETVLYSMNELQKKNEDGITTLFYLQKIFPDEWKNFLSRIGRNENAADSELFDSPNDILELRFWASYRGQTLARTVRGMMYYRKALMLQSYLERLSFEGSETTFSSSFLSETQGFDLSPEARAQADIKFTYVITCQIYGKQREEQKPEAADIALLMQRNEALRVAYIDAVENLKDGNAYTEYFSKLVKADIHGKDKEVYSIKLPGNPKLGEGKPENQNHAIVFTRGSAMQTIDMNQDNYFEEALKMRNLLEEFHCNHGLRQPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRIINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKAYLALSGVGETIQNRADILDNTALNAALNAQFLFQIGVFSAVPMVMGFILEQGFLRAIISFVTMQMQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIMFAENYRLYSRSHFVKGLEVVLLLIVYLAYGYNKGGALSYILLSISSWFMALSWLFAPYAFNPSGFEWQKTVEDFRDWTNWLFYRGGIGVKGEESWEAWWDEELAHIRTLRGRILETILSLRFFIFQYGIVYKLHLSGKDTSLTVYALSWIVLAGLFLLFQVFTVSQKATVNFQLLLRLVQSIFFLLILVGLVAAVVLTNLSLADIFACILAFIPTGWAILSIAVAWKPVMKRLHLWKSLRSLARLYDAGMGMFIFIPIAIFSWFPFVSTFQTRLLFNQAFSRGLEISLILAGNNPNTGI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006075	Biological Process	(1->3)-beta-D-glucan biosynthetic process
GO:0003843	Molecular Function	1,3-beta-D-glucan synthase activity
GO:0000148	Cellular Component	1,3-beta-D-glucan synthase complex
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.250
SRP064423	SRR2545915	Juvenile tuber	64.610
SRP108465	SRR5643513	five period of Gastrodia elata	25.070
	SRR5643514	five period of Gastrodia elata	29.290
	SRR5643515	five period of Gastrodia elata	27.970
	SRR5643524	five period of Gastrodia elata	30.310
	SRR5643525	five period of Gastrodia elata	27.420
	SRR5643528	five period of Gastrodia elata	21.000
	SRR5643658	five period of Gastrodia elata	31.040
	SRR5643659	five period of Gastrodia elata	27.390
	SRR5643660	five period of Gastrodia elata	28.840
	SRR5643661	five period of Gastrodia elata	25.950
	SRR5643662	five period of Gastrodia elata	19.920
	SRR5643663	five period of Gastrodia elata	26.510
	SRR5643664	five period of Gastrodia elata	21.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	23.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.830
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.180
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	37.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	35.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	39.700
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	32.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.670
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.670
SRP279888	Gastro	Gastrodia elata tuber	31.78
	Juven	Juvenile tuber	39.86
	Mother_Gastro	Mother tuber of Gastrodia elata	41.00
	Mother_Juven	Mother tuber of Juvenile	34.90