Detail information of GWHGAAEX018330/evm.TU.scaffold_92.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|46580087|ref|YP_010895.1|3.00E-52triosephosphate isomerase [Desulfovibrio vulgaris str. Hildenborough]
KOGKOG16431.00E-99Triosephosphate isomerase
nrgi|695060599|ref|XP_009418696.1|9.75E-109PREDICTED: triosephosphate isomerase, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprottr|P46225|TPIC_SECCE9.00E-104Triosephosphate isomerase, chloroplastic (Precursor)
trEMBLtr|M0U321|M0U321_MUSAM1.00E-108Triosephosphate isomerase {ECO:0000256|RuleBase:RU000517}
TAIRAT2G211701.00E-99triosephosphate isomerase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009331995203219157-
Transcript Sequence

Network for GWHGAAEX018330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00121.17TIM1623276.20E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01803TPI, tpiA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Inositol phosphate metabolismmap00562
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0004807Molecular Functiontriose-phosphate isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.040
SRR2545915Juvenile tuber39.190
SRP108465SRR5643513five period of Gastrodia elata58.560
SRR5643514five period of Gastrodia elata60.190
SRR5643515five period of Gastrodia elata53.160
SRR5643524five period of Gastrodia elata52.370
SRR5643525five period of Gastrodia elata57.700
SRR5643528five period of Gastrodia elata38.640
SRR5643658five period of Gastrodia elata49.990
SRR5643659five period of Gastrodia elata27.920
SRR5643660five period of Gastrodia elata40.640
SRR5643661five period of Gastrodia elata32.350
SRR5643662five period of Gastrodia elata53.780
SRR5643663five period of Gastrodia elata51.880
SRR5643664five period of Gastrodia elata45.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.430
SRR6049655Rhizomagastrodiae_C368-T10_good_123.780
SRR6049656Rhizomagastrodiae_C368-T07_good_162.240
SRR6049657Rhizomagastrodiae_C368-T07_good_151.100
SRR6049658Rhizomagastrodiae_C368-T04_good_147.160
SRR6049659Rhizomagastrodiae_C368-T04_good_137.480
SRR6049660Rhizomagastrodiae_C368-T01_good_141.360
SRR6049661Rhizomagastrodiae_C368-T04_good_152.480
SRR6049662Rhizomagastrodiae_C368-T01_good_156.630
SRR6049663Rhizomagastrodiae_C368-T01_good_144.620
SRR6049664Rhizomagastrodiae_C368-T10_good_143.690
SRR6049665Rhizomagastrodiae_C368-T10_good_143.690
SRP279888GastroGastrodia elata tuber 38.93
JuvenJuvenile tuber16.17
Mother_GastroMother tuber of Gastrodia elata 15.26
Mother_JuvenMother tuber of Juvenile 12.19