Detail information of GWHGAAEX018331/evm.TU.scaffold_92.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16431.00E-20Triosephosphate isomerase
nrgi|567190113|ref|XP_006404555.1|1.04E-23hypothetical protein EUTSA_v10000249mg [Eutrema salsugineum]
Swissprottr|Q9M4S8|TPIC_FRAAN1.00E-21Triosephosphate isomerase, chloroplastic (Precursor)
trEMBLtr|V4M1F7|V4M1F7_EUTSA4.00E-24Triosephosphate isomerase {ECO:0000256|RuleBase:RU000517}
TAIRAT2G211701.00E-20triosephosphate isomerase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009332200253259358-
Transcript Sequence

Network for GWHGAAEX018331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01803TPI, tpiA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Inositol phosphate metabolismmap00562
Carbon fixation in photosynthetic organismsmap00710

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.310
SRR2545915Juvenile tuber14.860
SRP108465SRR5643513five period of Gastrodia elata16.420
SRR5643514five period of Gastrodia elata15.500
SRR5643515five period of Gastrodia elata15.020
SRR5643524five period of Gastrodia elata16.320
SRR5643525five period of Gastrodia elata9.840
SRR5643528five period of Gastrodia elata8.880
SRR5643658five period of Gastrodia elata15.520
SRR5643659five period of Gastrodia elata11.010
SRR5643660five period of Gastrodia elata14.390
SRR5643661five period of Gastrodia elata7.810
SRR5643662five period of Gastrodia elata17.140
SRR5643663five period of Gastrodia elata20.260
SRR5643664five period of Gastrodia elata18.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.900
SRR6049655Rhizomagastrodiae_C368-T10_good_19.800
SRR6049656Rhizomagastrodiae_C368-T07_good_118.510
SRR6049657Rhizomagastrodiae_C368-T07_good_111.550
SRR6049658Rhizomagastrodiae_C368-T04_good_111.830
SRR6049659Rhizomagastrodiae_C368-T04_good_111.060
SRR6049660Rhizomagastrodiae_C368-T01_good_110.230
SRR6049661Rhizomagastrodiae_C368-T04_good_112.290
SRR6049662Rhizomagastrodiae_C368-T01_good_113.590
SRR6049663Rhizomagastrodiae_C368-T01_good_19.670
SRR6049664Rhizomagastrodiae_C368-T10_good_115.300
SRR6049665Rhizomagastrodiae_C368-T10_good_115.300
SRP279888GastroGastrodia elata tuber 11.16
JuvenJuvenile tuber8.30
Mother_GastroMother tuber of Gastrodia elata 4.43
Mother_JuvenMother tuber of Juvenile 3.65