Detail information of GWHGAAEX018335/evm.TU.scaffold_92.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16313.00E-75Translocon-associated complex TRAP, alpha subunit
nrgi|695040779|ref|XP_009407981.1|9.38E-133PREDICTED: translocon-associated protein subunit alpha-like [Musa acuminata subsp. malaccensis]
Swissprottr|P45434|SSRA_ARATH9.00E-76Translocon-associated protein subunit alpha (Precursor)
trEMBLtr|M0TF05|M0TF05_MUSAM3.00E-133Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05650_001}
TAIRAT2G211603.00E-75Translocon-associated protein (TRAP), alpha subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009333857513400392+
Transcript Sequence

Network for GWHGAAEX018335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03896.15TRAP_alpha272403.70E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13249SSR1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms137.700
SRR2545915Juvenile tuber198.990
SRP108465SRR5643513five period of Gastrodia elata171.100
SRR5643514five period of Gastrodia elata136.090
SRR5643515five period of Gastrodia elata170.170
SRR5643524five period of Gastrodia elata151.450
SRR5643525five period of Gastrodia elata128.660
SRR5643528five period of Gastrodia elata147.610
SRR5643658five period of Gastrodia elata114.300
SRR5643659five period of Gastrodia elata190.070
SRR5643660five period of Gastrodia elata210.830
SRR5643661five period of Gastrodia elata193.860
SRR5643662five period of Gastrodia elata163.920
SRR5643663five period of Gastrodia elata184.140
SRR5643664five period of Gastrodia elata177.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1176.620
SRR6049655Rhizomagastrodiae_C368-T10_good_1200.330
SRR6049656Rhizomagastrodiae_C368-T07_good_1176.220
SRR6049657Rhizomagastrodiae_C368-T07_good_1138.250
SRR6049658Rhizomagastrodiae_C368-T04_good_1155.390
SRR6049659Rhizomagastrodiae_C368-T04_good_1127.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1155.200
SRR6049661Rhizomagastrodiae_C368-T04_good_1157.890
SRR6049662Rhizomagastrodiae_C368-T01_good_1190.770
SRR6049663Rhizomagastrodiae_C368-T01_good_1168.340
SRR6049664Rhizomagastrodiae_C368-T10_good_1211.420
SRR6049665Rhizomagastrodiae_C368-T10_good_1211.420
SRP279888GastroGastrodia elata tuber 195.77
JuvenJuvenile tuber176.56
Mother_GastroMother tuber of Gastrodia elata 155.32
Mother_JuvenMother tuber of Juvenile 183.62