Detail information of GWHGAAEX018338/evm.TU.scaffold_92.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743779442|ref|XP_010920188.1|9.31E-104PREDICTED: eukaryotic translation initiation factor 3 subunit A isoform X2 [Elaeis guineensis]
trEMBLtr|M0SXK8|M0SXK8_MUSAM3.00E-83Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11290_001}
TAIRAT4G387106.00E-56glycine-rich protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009334942513506456+
Transcript Sequence

Network for GWHGAAEX018338

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06273.10eIF-4B73427.70E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms88.690
SRR2545915Juvenile tuber69.710
SRP108465SRR5643513five period of Gastrodia elata63.490
SRR5643514five period of Gastrodia elata50.650
SRR5643515five period of Gastrodia elata57.920
SRR5643524five period of Gastrodia elata52.630
SRR5643525five period of Gastrodia elata59.190
SRR5643528five period of Gastrodia elata79.870
SRR5643658five period of Gastrodia elata48.540
SRR5643659five period of Gastrodia elata94.620
SRR5643660five period of Gastrodia elata88.740
SRR5643661five period of Gastrodia elata89.520
SRR5643662five period of Gastrodia elata98.860
SRR5643663five period of Gastrodia elata101.430
SRR5643664five period of Gastrodia elata98.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_192.460
SRR6049655Rhizomagastrodiae_C368-T10_good_162.160
SRR6049656Rhizomagastrodiae_C368-T07_good_192.110
SRR6049657Rhizomagastrodiae_C368-T07_good_1115.150
SRR6049658Rhizomagastrodiae_C368-T04_good_184.630
SRR6049659Rhizomagastrodiae_C368-T04_good_198.500
SRR6049660Rhizomagastrodiae_C368-T01_good_188.050
SRR6049661Rhizomagastrodiae_C368-T04_good_183.680
SRR6049662Rhizomagastrodiae_C368-T01_good_162.330
SRR6049663Rhizomagastrodiae_C368-T01_good_167.340
SRR6049664Rhizomagastrodiae_C368-T10_good_170.830
SRR6049665Rhizomagastrodiae_C368-T10_good_170.830
SRP279888GastroGastrodia elata tuber 119.00
JuvenJuvenile tuber151.85
Mother_GastroMother tuber of Gastrodia elata 79.47
Mother_JuvenMother tuber of Juvenile 194.40