Gene detail

Detail information of GWHGAAEX018341/evm.TU.scaffold_92.104

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	3616375	3620246	-

Transcript Sequence
>GWHTAAEX018341 TCATTTTGCTTCAACAATTTTAATTTATCATATAAATTGTTAAAAAGATAGTTGTCATCCTTAACTCTTGTAATTTGTTCATTTTTGCCCATGACTTTTATTCATATAAAAGAGTAAATGATTAAAAAGAACAAATTGCAAGAGCCCATTTTGACAATTTTCTCAATTATTAAATGTTGCAATCTTAGAATCACAAATGCTATTTTAGATTCACAACAAGTTAGTTTATATATATTTTTTCAAATTTTATCATTCTTATATTAATTTATTTTTTATAACTTTTTTCTCCTTAATTTTTACTTAAACATATATTCTTACTGATAGAAACTTTCCCTTTATACTTTTAACTAGCTTTCAATTACAATTAGCAACCAAATTTACCATAAAGCATAAAAGCACATTCTAAAAGTTCTATCATCTAATTTTCTGGCATATTTTAGATATAGTGCTCTACTTTTTATACTCTTTATTTTAAAATTCTATCATCTAATTGAAATCATCCGCTAGAAACCAGGGATCCATTAGCCTAGAGCTTATTGCAGATAGATTGGTCCAGAGAGCATACCTTTCCAAGCGAGTGTTATATGCATAGATGAATGTGGCAAGAAACGAGATCATATTGGGTACATGTATCCTGCCATGAATGCATTGATCAGAGGTGATTAACGGGTCGAATTTAATTTTCCTTTGATCCCATAAAATAAGATTCTGCCCAGACTGAAACTGTGACAACAATGTGCCTTCAAGAAGGTCCATTTGGATCTTAGCACGGGATCCATGAAACTGCAATGACCAATTCTAGTTTCCAATAGCACAATTAGATTAGGCTTAATTTTTTTAAGTAAAATTTTGCAGTCTTGAAGTGCCTGTCAGAATTTAGGCCTCTGGTTCCAAAAGACTAAGAGGAACTTAAAACAGAGCATTATTGAGAACACAAACAAAGAAAAGAAACTCCACCACCTTGGATTATTTTTTAAGTGGAGGTTTGGCGTTTTTCCTAGTAACCATACGCCAACCAGTAGAAGTAGATGGGTCATCCACGGTCATTATTGAGCTTGATGTCGATTGGATGGGAAAGGTTGGGGGATATTAAGGTTAAGAGCACATGGAGAAGAGCTCCTTTTGATGGGAGAATCGTGTGATAGATAGTATTTCGGCCTCATGTGGCACAAGAGAAGGCATTGAAATTGTGGAGGATTGTATGACAACTGTTAGAAAAATAAGGTTAGAATTTCTTGTCGGAGATGACTGGGAGGATCTAGTAGGGGAGACCTCTCTCCTAGTTTGCAGCCAACGAGATCTACCTCATCTCGTTTCCGTTAGAATAGCACAAGGGCAGGAACCAAGCGAACAACGGAAATTGGTACACGAACCATAGATTACTGGTTTCATTCGTTAGTTATCGTCAGCCATTAATTATCAGCTCAATTAAACCCGTGAACGGGGATTTTGTGTTTACTTCAATGCATGCTCGAGCGAAGGTCAGACTTTTTTTTGGAGACAGTAAGTGAATTTGTCATTAGAGATGGCTAATTTTACTTGCTATTTTTGACAGAGCCTAATCAAATCATAGAACCAGAGGAATATTGGGGAATCTCACCTATACCAGGAGAGATTCAAAAGGATGGATCCCATTTGCGAACAAGGGACAACCAAAGAAAGAATACGAACCACCTTCCAATACCACCATATCATGGTCCTTTTGGGCAGGAAAAACGCAATATATAATATCCACTATCCATAGAAAGAAATTCAATATTACATTTGAGCTTCCATACCTTTCCCATGGCAGCAGAATAAGAGTGTTTTTCACCCAATACATAGCCGATTAGACAGGAGTTCTACTTGATCGAAAGCAATCAAGCTATATCCTCTATTGGTTGAAAGGTTAGACGGAAGGTGTCATTTGCTCGAGGATTTACAAGATACAATTTGAAGGATTATTATGTTTAAAATTTGCAGGCTGCCATAATGTGCCTGCTGCACGTTAGTGATGCATTCCCAAAAAAAAAAAAAAAGCAATTTTCGATGAAATAAAAAAATCAATTGGGGTCTTCTGCATAATAATTTATAACTTGCAAGGAATTATCCTTTCCAAAGTAGCACTGTAGCAACTAAGAAAAAAATAAATTTGAGAAGCGCTATATAATGAAATTCACTATAGAGGGGACTATAGGAAAAAGTGGATTAACTATTTTTGGTATTGTGTTTGCTATCGTGTGAAAATGTACAGCGTTGCTTGTTGCCAAGTGTCATTGGATTATCTGCTGTCCGGATTATCGCTAATCCTGCCACGAGTGGAAGACTTTTACATAATGTTTTCCTGCTCAGTAATGTTTCAGAATTTATCGATTACTGATCTAAACAAACCGCACTGTTTATCTTTGAATGGCCAGAAATGATCCTATTGTTAGCCATCAATCACTCACACGCTTTTGATGTATCACCGAACTAAAAATCTGCATTTAATGTTATATAAATGCAGCAAAAAGAAACGAACATAATAACATTTTTATCAACTTTTGCAGGGCATGGTGATGCGCTTAAATGCAGATAGATTTAGAAGTGTATGCAATTCTGACTTGTCAAGAACTTCTCTACTGTAGGAAGTTCTGTTGAAGATTTGTTAAAAATTTGTTTTGTTGATGTAATTCATGCTGAAAGATTAGATCTGTTATTATCACCTTTGAAAACCATACAATGATTTAATGTTGGCACATCATTTGTTGGTAAATCATTTGTTGATTTTGAAGTTGTTGGATTCTGAGTTGATATTTGTGGTTCTCATTACAAATTTGTTTAAAGTTCTGATTTCGGGCAACATGATTACCATTACATGTTTATTTTTGTAATTTGCGACGCTTAGATGGGAATCGTTAAAAGATTACAGACTGCATCAATTGTGCAAATTGAATTCTTCATAAAATTAATGAGAGGTACTTTTACTTGTAACAATAAATTGGAACATGTAGCATCTCTCGTGTGAAAATTTACAGCATTGCGCTCGTTCATACTAACAAATTTACAAGAAATCGGTGGAACTGTTATTATGACCACGAAAACTACGCAGATCAGGAATTAACAGATCCCAATCCAGTTGCTCGTCGCGCATCGAACGGCGTTTCAGCAACGCAATCTTTGGCTTCTTCGAATCAGAAAAAGAAAGGGAGGCTATAAATGGATGCACCTCTTAGCGTTCAATAGGATCAGATCCGTCCGCCCGTTCACGCATCGAGCAGCATTCTACCAGCACTGATCGGTCTCCCAGGTGCGGCGAGGCGGATGGCCGGAGAATCTGTAGCTCCGCAGCGGCTGAGGTCGCCGGAGAGCCAAGAGCTGCCGATCGTACTTCTCCCGTTTGGCGGGATCGGAAAGAGTGGAGTAAGCGGAGTGAATGCTCATGAAATCGTCCGCAGATGCTCCGCCTCTGCGCACGTCGGGGTGGCACGTGCGCGCCAGGCTCCGATACGCGGTCTTGATCTCACGGACGGTGGCCCTCTCTCCCAATCCGAGAACGTCGTAGAGAGAGATCGATTGGGGGGAAGAAATCGATGGCGCGATGGAAGCTCTTATAGATCGAAAGAAGGGGAGACGGGACGGCGAAGAGGAGAGGGACGGATGGACAGAGACGAACATATGGAGAGAATTTGGTACTTGGTGGAGCTGATGTGCGAGACGCGCCTCCTTTTATAGGGCAGAAGAACAATACATTGGGCCGCAATCGGATAAGATGAAATCAATGGGAGGCACCCCTAAATCCATAATACTAGCTTTGATTTTAAACTTTTAATTATTTTTTTTTTAAATTTTCTACGAATAAATATTGGAAAACATTTTTAATGTGAAAATTTATATTTTATTTTTGCTATGAG

Network for GWHGAAEX018341

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.400
SRP064423	SRR2545915	Juvenile tuber	19.230
SRP108465	SRR5643513	five period of Gastrodia elata	11.740
	SRR5643514	five period of Gastrodia elata	20.620
	SRR5643515	five period of Gastrodia elata	13.710
	SRR5643524	five period of Gastrodia elata	15.590
	SRR5643525	five period of Gastrodia elata	23.040
	SRR5643528	five period of Gastrodia elata	19.210
	SRR5643658	five period of Gastrodia elata	34.450
	SRR5643659	five period of Gastrodia elata	5.600
	SRR5643660	five period of Gastrodia elata	5.360
	SRR5643661	five period of Gastrodia elata	5.560
	SRR5643662	five period of Gastrodia elata	4.700
	SRR5643663	five period of Gastrodia elata	5.690
	SRR5643664	five period of Gastrodia elata	4.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.160
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.200
SRP279888	Gastro	Gastrodia elata tuber	6.75
	Juven	Juvenile tuber	17.71
	Mother_Gastro	Mother tuber of Gastrodia elata	113.43
	Mother_Juven	Mother tuber of Juvenile	93.68