Gene detail

Detail information of GWHGAAEX018346/evm.TU.scaffold_92.110

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|333983318\|ref\|YP_004512528.1\|	2.00E-07	methyltransferase-16 [Methylomonas methanica MC09]
KOG	KOG3201	3.00E-48	Uncharacterized conserved protein
nr	gi\|743779399\|ref\|XP_010920165.1\|	4.09E-132	PREDICTED: calmodulin-lysine N-methyltransferase isoform X1 [Elaeis guineensis]
trEMBL	tr\|W5E8N8\|W5E8N8_WHEAT	5.00E-118	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Traes_4BL_FE3EA0B32.1}
TAIR	AT4G35990	3.00E-48	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000093	3765229	3793188	-

Transcript Sequence
>GWHTAAEX018346 GAGAAGCTTTCATTTGCACGAAAAACGTATAAATCAAAAACGACTGCCATTCATCAACCACTTCGTCGTTCGAGTACATCTTCTTCGTCCAAGTCTTGATCGTTCGTCCACGGCTTGGCCGTTTGTTCATGACTTCGCTGTTCGAATCCACGAATTTGTCGTAAACCGAATTCGTACTAAATCAATTTCTCGATCCATTTTACCCCTGTTCATTTCAAACAAAAAAAGCATTAAATTTTTTATAAAATTACAAAATAACATGATTACATTTCAATTCAAATATAAGTACTAGCATACTAATTGAGTAGTGTTTTTATCCTAGACAGATTCGTATATGGTTTACAAGGATCCGATAAATACTTCCCTTAATATCACCCAAATTCGCTAAACTCGGCACACGGATCCGATAAAAAACTATCTTTGCAAGAAGCCGCCGACGAGAATGGAGACGCCTCGAGCCGCGATTACTCCATCCCGAGGTACTTTACGGTGGAAGATTCTTCGCCAGGCAATCAAAATCCCACCCGTATCTCCTTCGTTCTCTACTTCCGTCGATGATCATTCAATTGGAAGGTGTGCCAAGAAAATATCTAGGAAGAGTCATGGCGGATTTCAACTGATTTTATGCTCTCCTTTAAATGATCATATATTGGGTGAATTTTATTCAGCAGGCTACTCATGTCAATTTGGTCCAAATGAACTACCTGTCTGCTATACATTACCTGTTGAAGGAGATACCACACTTATTATGATCCAGAGGTTGGGCGATTGTATTGATTTGGATGATTTTAAAGCCTCTAACAAACATGACATCGATACAACAGGTTTAGTATGTTGCTGGCCCTCAGAAGATGTGCTAGCTTATTTTTGTGTCATCAATTATGAAATGTTCAGATCCAAGAGAGTGCTTGAACTTGGATCAGGGTACGGATTAGCTGGATTGGCAATTGCTGCAAGTACTCGTGCTTTAGAAGTTGTGATTTCTGATGGAAATCCTCAAGTTATTGATTATGTTCAGCGTAACATAAATATGAATGCTAGAACTTTTGGAGACACTTCTGTTAGATCAAGGATTTTGCACTGGAATCAAGATCATAATCCAGAAATGCTGAACTCATTTGACATAATCATTGCAAGTGATTGCACATTCTTTAAGGAATTCCATGAATGCCTTGCTCAAACAGTCAAATCATTGTTGAAGAAGTCAGAAACATCTGAAGCCATCTTTTTCAGCCCAAAGAGGGGTGATTCATTGGACAATTTTTTGGTGAAAATCAAAGATATGGGTCTGGTTTATAATTTGTTTGAGAACTATGATAGTAAAGTATGGAAGCTTCATCAGAAATTTCGAAATGAGGACAGCTCATCTTGGCCCAACTATGATGAAGGTCACTGTTATCCTTACCTCCTAAGGATCAAACATCATTCCTACAGCAATGCTCTGAATTGGTAATGCATTTATGGTATTTTAGTTTTTTATTCCTTGTATTTTCTATCTTCTACCATTTAATTTGATTATTTACGAGTCATTATGATTCTCCCCATGATTCATCAAGTCTTTCTTTTTTGTTTGTAATATTTATTATATGTAAACAACTTTTGAAGCTGTTTTCATTCAACTCATTGATATGATTATTCATTT

Network for GWHGAAEX018346

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10294.8	Methyltransf_16	147	279	6.40E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K18826	CAMKMT	Metabolic pathways	map01100
K18826	CAMKMT	Lysine degradation	map00310

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.310
SRP064423	SRR2545915	Juvenile tuber	8.910
SRP108465	SRR5643513	five period of Gastrodia elata	4.140
	SRR5643514	five period of Gastrodia elata	4.900
	SRR5643515	five period of Gastrodia elata	3.030
	SRR5643524	five period of Gastrodia elata	4.660
	SRR5643525	five period of Gastrodia elata	5.230
	SRR5643528	five period of Gastrodia elata	2.740
	SRR5643658	five period of Gastrodia elata	4.270
	SRR5643659	five period of Gastrodia elata	4.160
	SRR5643660	five period of Gastrodia elata	3.160
	SRR5643661	five period of Gastrodia elata	4.070
	SRR5643662	five period of Gastrodia elata	4.040
	SRR5643663	five period of Gastrodia elata	4.470
	SRR5643664	five period of Gastrodia elata	5.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.360
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.170
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.190
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.920
SRP279888	Gastro	Gastrodia elata tuber	3.55
	Juven	Juvenile tuber	7.41
	Mother_Gastro	Mother tuber of Gastrodia elata	4.20
	Mother_Juven	Mother tuber of Juvenile	4.89