Detail information of GWHGAAEX018350/evm.TU.scaffold_92.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13623.00E-168Choline transporter-like protein
nrgi|695051509|ref|XP_009413780.1|0PREDICTED: protein PNS1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TRV1|M0TRV1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P19480_001}
TAIRAT4G386403.00E-168Plasma-membrane choline transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009338426243856113+
Transcript Sequence

Network for GWHGAAEX018350

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04515.11Choline_transpo1975071.80E-59
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.140
SRR2545915Juvenile tuber41.340
SRP108465SRR5643513five period of Gastrodia elata29.790
SRR5643514five period of Gastrodia elata28.040
SRR5643515five period of Gastrodia elata29.080
SRR5643524five period of Gastrodia elata29.290
SRR5643525five period of Gastrodia elata42.790
SRR5643528five period of Gastrodia elata30.970
SRR5643658five period of Gastrodia elata57.310
SRR5643659five period of Gastrodia elata22.330
SRR5643660five period of Gastrodia elata21.140
SRR5643661five period of Gastrodia elata23.030
SRR5643662five period of Gastrodia elata22.130
SRR5643663five period of Gastrodia elata29.650
SRR5643664five period of Gastrodia elata22.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.520
SRR6049655Rhizomagastrodiae_C368-T10_good_138.600
SRR6049656Rhizomagastrodiae_C368-T07_good_131.110
SRR6049657Rhizomagastrodiae_C368-T07_good_130.990
SRR6049658Rhizomagastrodiae_C368-T04_good_127.220
SRR6049659Rhizomagastrodiae_C368-T04_good_130.660
SRR6049660Rhizomagastrodiae_C368-T01_good_128.680
SRR6049661Rhizomagastrodiae_C368-T04_good_129.470
SRR6049662Rhizomagastrodiae_C368-T01_good_130.870
SRR6049663Rhizomagastrodiae_C368-T01_good_126.220
SRR6049664Rhizomagastrodiae_C368-T10_good_132.460
SRR6049665Rhizomagastrodiae_C368-T10_good_132.460
SRP279888GastroGastrodia elata tuber 17.81
JuvenJuvenile tuber25.01
Mother_GastroMother tuber of Gastrodia elata 31.77
Mother_JuvenMother tuber of Juvenile 22.33