Detail information of GWHGAAEX018352/evm.TU.scaffold_92.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20094467|ref|NP_614314.1|7.00E-13Type I signal peptidase [Methanopyrus kandleri AV19]
KOGKOG33424.00E-91Signal peptidase I
nrgi|595807652|ref|XP_007202647.1|7.45E-91hypothetical protein PRUPE_ppa012191mg [Prunus persica]
trEMBLtr|M5VS43|M5VS43_PRUPE3.00E-91Uncharacterized protein {ECO:0000313|EMBL:EMJ03846.1}
TAIRAT1G526004.00E-91Peptidase S24/S26A/S26B/S26C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009338720203912194-
Transcript Sequence

Network for GWHGAAEX018352

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00717.22Peptidase_S24531111.10E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13280SEC11, sipW Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006465Biological Processsignal peptide processing
GO:0008233Molecular Functionpeptidase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.910
SRR2545915Juvenile tuber38.110
SRP108465SRR5643513five period of Gastrodia elata55.220
SRR5643514five period of Gastrodia elata68.000
SRR5643515five period of Gastrodia elata48.190
SRR5643524five period of Gastrodia elata67.370
SRR5643525five period of Gastrodia elata39.130
SRR5643528five period of Gastrodia elata46.540
SRR5643658five period of Gastrodia elata35.090
SRR5643659five period of Gastrodia elata36.450
SRR5643660five period of Gastrodia elata33.200
SRR5643661five period of Gastrodia elata33.560
SRR5643662five period of Gastrodia elata33.680
SRR5643663five period of Gastrodia elata37.400
SRR5643664five period of Gastrodia elata32.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.820
SRR6049655Rhizomagastrodiae_C368-T10_good_185.990
SRR6049656Rhizomagastrodiae_C368-T07_good_153.640
SRR6049657Rhizomagastrodiae_C368-T07_good_137.180
SRR6049658Rhizomagastrodiae_C368-T04_good_138.480
SRR6049659Rhizomagastrodiae_C368-T04_good_133.910
SRR6049660Rhizomagastrodiae_C368-T01_good_145.360
SRR6049661Rhizomagastrodiae_C368-T04_good_138.460
SRR6049662Rhizomagastrodiae_C368-T01_good_165.880
SRR6049663Rhizomagastrodiae_C368-T01_good_158.270
SRR6049664Rhizomagastrodiae_C368-T10_good_179.980
SRR6049665Rhizomagastrodiae_C368-T10_good_179.980
SRP279888GastroGastrodia elata tuber 42.40
JuvenJuvenile tuber50.39
Mother_GastroMother tuber of Gastrodia elata 49.46
Mother_JuvenMother tuber of Juvenile 46.05