Detail information of GWHGAAEX018367/evm.TU.scaffold_93.17
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|57233807|ref|YP_182125.1| | 7.00E-177 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Dehalococcoides ethenogenes 195] |
| KOG | KOG2555 | 0 | AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase |
| nr | gi|743767917|ref|XP_010914234.1| | 0 | PREDICTED: bifunctional purine biosynthesis protein purH isoform X2 [Elaeis guineensis] |
| trEMBL | tr|B9SXJ1|B9SXJ1_RICCO | 0 | Bifunctional purine biosynthesis protein, putative {ECO:0000313|EMBL:EEF31664.1} |
| TAIR | AT2G35040 | 0 | AICARFT/IMPCHase bienzyme family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000100 | 996504 | 1043748 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018367
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02142.21 | MGS | 104 | 214 | 2.70E-25 |
| PF01808.17 | AICARFT_IMPCHas | 219 | 542 | 9.40E-111 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006164 | Biological Process | purine nucleotide biosynthetic process |
| GO:0003937 | Molecular Function | IMP cyclohydrolase activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004643 | Molecular Function | phosphoribosylaminoimidazolecarboxamide formyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 13.470 |
| SRR2545915 | Juvenile tuber | 15.100 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.110 |
| SRR5643514 | five period of Gastrodia elata | 17.730 | |
| SRR5643515 | five period of Gastrodia elata | 12.140 | |
| SRR5643524 | five period of Gastrodia elata | 16.320 | |
| SRR5643525 | five period of Gastrodia elata | 7.840 | |
| SRR5643528 | five period of Gastrodia elata | 9.540 | |
| SRR5643658 | five period of Gastrodia elata | 7.350 | |
| SRR5643659 | five period of Gastrodia elata | 17.040 | |
| SRR5643660 | five period of Gastrodia elata | 15.950 | |
| SRR5643661 | five period of Gastrodia elata | 16.460 | |
| SRR5643662 | five period of Gastrodia elata | 16.670 | |
| SRR5643663 | five period of Gastrodia elata | 17.550 | |
| SRR5643664 | five period of Gastrodia elata | 15.060 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.910 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.050 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.060 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.060 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 25.40 |
| Juven | Juvenile tuber | 23.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 17.17 | |
| Mother_Juven | Mother tuber of Juvenile | 22.10 |