Detail information of GWHGAAEX018375/evm.TU.scaffold_93.32
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108759555|ref|YP_628371.1| | 1.00E-25 | 2OG-Fe(II) oxygenase [Myxococcus xanthus DK 1622] |
| KOG | KOG0143 | 6.00E-142 | Iron/ascorbate family oxidoreductases |
| nr | gi|681883978|gb|AIM58714.1| | 8.45E-179 | flavonol synthase [Cymbidium hybrid cultivar] |
| Swissprot | tr|Q9ZWQ9|FLS_CITUN | 2.00E-151 | Flavonol synthase/flavanone 3-hydroxylase |
| trEMBL | tr|A0A088G4R1|A0A088G4R1_9ASPA | 3.00E-179 | Flavonol synthase {ECO:0000313|EMBL:AIM58714.1} |
| TAIR | AT5G08640 | 6.00E-142 | flavonol synthase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000100 | 1840450 | 1841868 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018375
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14226.5 | DIOX_N | 47 | 147 | 2.30E-19 |
| PF03171.19 | 2OG-FeII_Oxy | 197 | 292 | 1.20E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05278 | FLS | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.230 |
| SRR2545915 | Juvenile tuber | 13.420 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.790 |
| SRR5643514 | five period of Gastrodia elata | 11.270 | |
| SRR5643515 | five period of Gastrodia elata | 17.920 | |
| SRR5643524 | five period of Gastrodia elata | 10.900 | |
| SRR5643525 | five period of Gastrodia elata | 5.710 | |
| SRR5643528 | five period of Gastrodia elata | 7.780 | |
| SRR5643658 | five period of Gastrodia elata | 14.920 | |
| SRR5643659 | five period of Gastrodia elata | 5.430 | |
| SRR5643660 | five period of Gastrodia elata | 6.270 | |
| SRR5643661 | five period of Gastrodia elata | 4.240 | |
| SRR5643662 | five period of Gastrodia elata | 3.580 | |
| SRR5643663 | five period of Gastrodia elata | 2.650 | |
| SRR5643664 | five period of Gastrodia elata | 6.640 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.320 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.540 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.760 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.510 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.990 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 22.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.960 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.720 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.980 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.980 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 23.90 |
| Juven | Juvenile tuber | 10.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.36 | |
| Mother_Juven | Mother tuber of Juvenile | 9.89 |