Detail information of GWHGAAEX018379/evm.TU.scaffold_93.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743860578|ref|XP_010943050.1|1.62E-53PREDICTED: ethylene-responsive transcription factor ERF109-like [Elaeis guineensis]
Swissprottr|Q9SZ06|EF109_ARATH8.00E-36Ethylene-responsive transcription factor ERF109
trEMBLtr|I1I7T6|I1I7T6_BRADI6.00E-52Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G38140.1}
TAIRAT4G344103.00E-35redox responsive transcription factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010023826702383461+
Transcript Sequence

Network for GWHGAAEX018379

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2871378.20E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.820
SRR2545915Juvenile tuber3.340
SRP108465SRR5643513five period of Gastrodia elata18.810
SRR5643514five period of Gastrodia elata8.870
SRR5643515five period of Gastrodia elata144.010
SRR5643524five period of Gastrodia elata4.650
SRR5643525five period of Gastrodia elata104.190
SRR5643528five period of Gastrodia elata38.110
SRR5643658five period of Gastrodia elata68.050
SRR5643659five period of Gastrodia elata35.490
SRR5643660five period of Gastrodia elata5.140
SRR5643661five period of Gastrodia elata9.550
SRR5643662five period of Gastrodia elata48.570
SRR5643663five period of Gastrodia elata32.720
SRR5643664five period of Gastrodia elata530.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.530
SRR6049655Rhizomagastrodiae_C368-T10_good_143.610
SRR6049656Rhizomagastrodiae_C368-T07_good_134.970
SRR6049657Rhizomagastrodiae_C368-T07_good_151.290
SRR6049658Rhizomagastrodiae_C368-T04_good_154.580
SRR6049659Rhizomagastrodiae_C368-T04_good_149.970
SRR6049660Rhizomagastrodiae_C368-T01_good_1233.240
SRR6049661Rhizomagastrodiae_C368-T04_good_163.680
SRR6049662Rhizomagastrodiae_C368-T01_good_133.630
SRR6049663Rhizomagastrodiae_C368-T01_good_1131.380
SRR6049664Rhizomagastrodiae_C368-T10_good_159.500
SRR6049665Rhizomagastrodiae_C368-T10_good_159.500
SRP279888GastroGastrodia elata tuber 8.41
JuvenJuvenile tuber1.62
Mother_GastroMother tuber of Gastrodia elata 33.26
Mother_JuvenMother tuber of Juvenile 13.79