Detail information of GWHGAAEX018380/evm.TU.scaffold_93.50
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0753 | 9.00E-130 | Mitochondrial fatty acid anion carrier protein/Uncoupling protein |
| nr | gi|700256348|gb|AIU49792.1| | 1.43E-162 | uncoupling protein 3, partial [Iris japonica] |
| Swissprot | tr|Q9XI74|PUMP3_ARATH | 3.00E-130 | Mitochondrial uncoupling protein 3 |
| trEMBL | tr|A0A097PP35|A0A097PP35_9ASPA | 5.00E-163 | Uncoupling protein 3 {ECO:0000313|EMBL:AIU49792.1} (Fragment) |
| TAIR | AT1G14140 | 9.00E-130 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000100 | 2655296 | 2677210 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018380
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 11 | 101 | 2.30E-15 |
| PF00153.26 | Mito_carr | 105 | 195 | 3.20E-20 |
| PF00153.26 | Mito_carr | 202 | 292 | 2.10E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.390 |
| SRR2545915 | Juvenile tuber | 0.330 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.760 |
| SRR5643514 | five period of Gastrodia elata | 3.040 | |
| SRR5643515 | five period of Gastrodia elata | 0.970 | |
| SRR5643524 | five period of Gastrodia elata | 1.710 | |
| SRR5643525 | five period of Gastrodia elata | 0.520 | |
| SRR5643528 | five period of Gastrodia elata | 0.740 | |
| SRR5643658 | five period of Gastrodia elata | 0.630 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.470 | |
| SRR5643662 | five period of Gastrodia elata | 0.370 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.440 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.610 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.990 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.170 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.710 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.930 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.800 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.720 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.720 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.62 |
| Juven | Juvenile tuber | 1.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.50 | |
| Mother_Juven | Mother tuber of Juvenile | 2.00 |