Detail information of GWHGAAEX018381/evm.TU.scaffold_93.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00278.00E-38Calmodulin and related proteins (EF-Hand superfamily)
nrgi|743860530|ref|XP_010943035.1|5.45E-59PREDICTED: calmodulin-like protein 1 [Elaeis guineensis]
Swissprottr|Q9ZQE6|CML1_ARATH2.00E-38Calmodulin-like protein 1
trEMBLtr|B9HS04|B9HS04_POPTR9.00E-53Calmodulin-related family protein {ECO:0000313|EMBL:EEE87803.1}
TAIRAT2G156808.00E-38Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010026786152679166+
Transcript Sequence

Network for GWHGAAEX018381

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_7461058.60E-08
PF13499.5EF-hand_71141764.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.750
SRR2545915Juvenile tuber4.240
SRP108465SRR5643513five period of Gastrodia elata3.190
SRR5643514five period of Gastrodia elata4.510
SRR5643515five period of Gastrodia elata2.570
SRR5643524five period of Gastrodia elata2.250
SRR5643525five period of Gastrodia elata0.680
SRR5643528five period of Gastrodia elata1.300
SRR5643658five period of Gastrodia elata0.330
SRR5643659five period of Gastrodia elata0.860
SRR5643660five period of Gastrodia elata3.220
SRR5643661five period of Gastrodia elata1.910
SRR5643662five period of Gastrodia elata1.340
SRR5643663five period of Gastrodia elata0.870
SRR5643664five period of Gastrodia elata3.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.710
SRR6049655Rhizomagastrodiae_C368-T10_good_10.490
SRR6049656Rhizomagastrodiae_C368-T07_good_13.040
SRR6049657Rhizomagastrodiae_C368-T07_good_10.810
SRR6049658Rhizomagastrodiae_C368-T04_good_10.600
SRR6049659Rhizomagastrodiae_C368-T04_good_10.470
SRR6049660Rhizomagastrodiae_C368-T01_good_10.880
SRR6049661Rhizomagastrodiae_C368-T04_good_11.950
SRR6049662Rhizomagastrodiae_C368-T01_good_13.590
SRR6049663Rhizomagastrodiae_C368-T01_good_10.640
SRR6049664Rhizomagastrodiae_C368-T10_good_12.470
SRR6049665Rhizomagastrodiae_C368-T10_good_12.470
SRP279888GastroGastrodia elata tuber 2.65
JuvenJuvenile tuber3.58
Mother_GastroMother tuber of Gastrodia elata 1.65
Mother_JuvenMother tuber of Juvenile 3.47