Detail information of GWHGAAEX018392/evm.TU.scaffold_93.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320159919|ref|YP_004173143.1|0putative M16C family peptidase [Anaerolinea thermophila UNI-1]
KOGKOG20190Metalloendoprotease HMP1 (insulinase superfamily)
nrgi|695058599|ref|XP_009417618.1|0PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VY06|PREP2_ARATH0Presequence protease 2, chloroplastic/mitochondrial (Precursor)
trEMBLtr|M0U0I0|M0U0I0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P15220_001}
TAIRAT3G191700presequence protease 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010035992593661900-
Transcript Sequence

Network for GWHGAAEX018392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00675.19Peptidase_M161452194.00E-06
PF05193.20Peptidase_M16_C2924793.10E-25
PF08367.10M16C_assoc5578061.70E-78
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0046872Molecular Functionmetal ion binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.380
SRR2545915Juvenile tuber20.450
SRP108465SRR5643513five period of Gastrodia elata16.530
SRR5643514five period of Gastrodia elata21.120
SRR5643515five period of Gastrodia elata18.130
SRR5643524five period of Gastrodia elata19.670
SRR5643525five period of Gastrodia elata16.240
SRR5643528five period of Gastrodia elata18.600
SRR5643658five period of Gastrodia elata18.560
SRR5643659five period of Gastrodia elata15.410
SRR5643660five period of Gastrodia elata15.100
SRR5643661five period of Gastrodia elata12.860
SRR5643662five period of Gastrodia elata13.810
SRR5643663five period of Gastrodia elata14.940
SRR5643664five period of Gastrodia elata12.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.630
SRR6049655Rhizomagastrodiae_C368-T10_good_121.880
SRR6049656Rhizomagastrodiae_C368-T07_good_126.960
SRR6049657Rhizomagastrodiae_C368-T07_good_121.280
SRR6049658Rhizomagastrodiae_C368-T04_good_123.920
SRR6049659Rhizomagastrodiae_C368-T04_good_123.080
SRR6049660Rhizomagastrodiae_C368-T01_good_125.890
SRR6049661Rhizomagastrodiae_C368-T04_good_129.490
SRR6049662Rhizomagastrodiae_C368-T01_good_134.500
SRR6049663Rhizomagastrodiae_C368-T01_good_129.690
SRR6049664Rhizomagastrodiae_C368-T10_good_128.150
SRR6049665Rhizomagastrodiae_C368-T10_good_128.150
SRP279888GastroGastrodia elata tuber 20.25
JuvenJuvenile tuber15.15
Mother_GastroMother tuber of Gastrodia elata 21.73
Mother_JuvenMother tuber of Juvenile 19.02