Gene detail

Detail information of GWHGAAEX018395/evm.TU.scaffold_93.77

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0239	Kinesin (KAR3 subfamily)
nr	gi\|743859300\|ref\|XP_010942682.1\|	PREDICTED: kinesin-like protein KCA2 [Elaeis guineensis]
Swissprot	tr\|Q9LX99\|KCA1_ARATH	Kinesin-like protein KCA1
trEMBL	tr\|M0TSZ2\|M0TSZ2_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT5G10470	kinesin like protein for actin based chloroplast movement 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000100	4021438	4131189	-

Transcript Sequence
>GWHTAAEX018395 ATTAGCAACTCCATTTGAAAGGGAAGTGCGCCTCGAGGAAGCACGCCGCAGAGACGCTGGTGGGAAGACCAAATTGAAAAGAATGTATGCAGAGAATGGAGAAGAGGGCATATGAAAAGCCCGTATCAGGGGGTCAGACGGCCAGTAGCTCTCTCCTTATTCTTGAGAATAATAGAGAGTGAATCACATAAAAGCCTTGTAGAACTTCAATCGTCGCCTTTCCCATTCCCGTCATATCTGTGCCTCTCCGATCGCTGTCACAATTCTTCCTCACCTGATAAATCTTTAATCCCCGTCTCGGGACATTGCACTTTCTTATCGTCTGCCGGTGCTCGGGACGCTAGGGCTTAGTAGAACTAGGGAATGGAAGAACAGAGGAACAGATGGACCTGGGATTTACCGTTGTTCGAGCCGGGGAGTTCGTTGGAGTGGGGCGATCATAAGCAGCAGCCTCCGGTTAGAAACTCGCCTTTGTCTTCATCACCGGAGCTGCGGACTGAGTTCGAGAGACAGTCAGTCAATGAGAAATTTCACGAGCTTCAGGACCAAGTGAAGCATGCTAGGCAAGATTACTTGGAGTTGAGACAAGAAGCCAACGATCTTATAGAGTATTCAAATGCCAAGCTTAGTCGGGTTTTGCGCTATCTTGGAGTTCTTGCTGACAGGACTCGGAAGCTAGATCAAGCTGCTATAGAAGCTGAATCAAGAATTGCACCCTTGCTTGATGAGAAGAAAAGGCTGTTTAATGAATTATTGACTAACAAGGGGAACGTAAGGGTGTTTTGTCGTGTAAGACCTCCATTTGAAGATGAAGGTCCATCTGCAGTTGGGTTTCCTGATGAGTTTACTGTTTGCATTGATACTGGTGATGATTCTTTGACCAATTCAAAAAAGGACTATGAGTTTGATAGAGTTTATGGTCCTCATATTGGACAAGGTGTATTTTTCAACGATGTCCAACCTTATGCTCAGTCAGCAATTGACGGTTATAATGTTTCTATATTTGCGTTTGGGCAAAGTAATTCTGGAAAAACACACACAATGGAAGGTACAAGTCAAGAGCGAGGTTTATACCAACGGAGTTTTGAAGAATTGTTTGATTTATCCAATATGGATATGACATCAATATGTCAGTATAAATTTAAAATCACTGCTTTTAACCTCTACAACGAGCAGATTCGTGATTTGCTGGCAAATAGTAAGAGCAGCACTACAACAACAATTCAGATGGGCATCCAAGATTCTCCTGTGGAACTTGTGCTTGAAGATGTTAACAATCCTGTTGAATTTTCACAAGTGCTAAAACAAGTACTTATGAATCGAGAGGCGAATTCCTTGAAAGCCAATGTATCACATTTGGTTGTCACAATCCATATATTTTATACTAATTTGATTACAAGGGAACATGCCTATAGCAAACTTTCTCTTGTAGACTTGCCTGGCAGTGAATGCTTGCTTGTTGAAGATGCCAGTGGTGATCAAGTCACAGACTTTCTACATGTGTCTAAGTCGCTTTCTGCATTGGGGGATGTTTTATGGTCATTGACATCAAAGAAACAAACCGTATCGTTTGGGAATTCAAGGCTCACCAAAATACTTGCAGACTCTATAGGTAATAGCTCAAAGGCGCTGTTAATTGCTCATGTTTGTCCAACTACTTCAAATGTAGCGAGAACTCTGTGTACCCTTAACTTTTCTGCAAGGGCAAGAAATGCTGAGCTAAGTCTTGGAAACAGAGATACAATAAAGAAATGGAAAGATGAGGCAAATGATTCTCGCAAGGAGCTATATGAGAAAGATAAGGAGGTTCAGCTTGTAAAACTACAAAATTTTGAACTAAAGGTTGCTCTTAAGGATGCCAATGATCAGTGCATGCTACTATTTAATGAAATTCAGAAAGTCTGGAAGGTTTCATTCATGCTGCAGACTGATATTAAGTCTAAAAACGCTATACTGGCTGAGGAGCTCAAATTTGAAAAAGATCAGAATATTCAACTGAGTAATCAAGTTGCTAGTCTCTTACAACTAGATCATGAGCAGAAAATGCAAATGCATGAGCAGAATTTAAATATACAAAATCTGCAGGACAAAATTAAGGGCATCAAGTCACAACCCAAAGACACCATTTGTTCAAGTGATTTACGATCAGCCAAGTGCATTTCTGCTAGCTCTTTTTCTTCATCAAAAATGGTTCAGAACAGTGTTAATTCAGCTAGCATTATTAGAATACTTGAAGAAGAGATCTCTAAGCGTGATGCATTGATCGAGAATTTAAATCAGGAGAATGAAAAATTGTTCGACAGGCTATCAGAGAATTCATCTTTGGGCGAATCTTCACAGGTGTCTAGTTCTTTCAAAAGGTTGGCTTCCTCTCAAGCAAGAAACACGAACAGGAGTGAAAGTACTAAAGCATATTCAATAGATGTTCCTCGGTCATTAGAGGACAAAATGAAAATGATGGGAGCTTTGGTTAAAATTGATAAACCAAAAACACCTGCTGGAGCGTACCTTAATGCTGCTCTGATGGACTTTGATCCTGATCAATTTGATAGCTTTGAAACTATTGTTGATGGAGCAAATAAACTTCTAATGCTGGTCTTAGCAGCGGTAATCAAAGCTGGGGCTGCCAGGGAGCATGAAATCTTGGCTGAAATCAGAGATGCTGTTCTTGCATTCATACGAAAAATGGAACCTATGAGAGTAATGGATACTATGCTAGTTTCTCGGGTTAGAATTTTGTATATACGATCCTTGCTTGCCAGATCACCTGAACTTCAATCTATCAAGGTATCTTCAGTTGAGAGATTTCTTGGGAGAGCTAATAGTGGCCAAAGAAAAACTTTAAGCCAAGGTAACAGTCCTGTGAGATCTCCTGTCTATCACGATTCAGGTGGGAGGAGCATTTTTTTAATTGGAGAGCATGCCCAAAAATTTGAGGTGAACTTAAGCCAAGAAAAAAAGTCAAAATTTTCATGGATACTATTAAAACTTCGAGGCATTGATGAGGAAACTTTGAAGCAGCAGATTACTGGTGTAAAACTTCGTGAGATAACTGAGGAAGCTAAAGTTTTTGCTGTAGGCTTCAAGCCTCTTGCTGCACTATTTGTTCACACTCCTGCTGGTGAGCTCCAACGTCAAATTGGCTCCTGGATTGCTGAGAATTTTGAGTTTCTTTCAGTTACAAGCAGTGATTCCTTAGGCGGAACAACAGGAGAGTTAGAACTTCTATCTATGGCAATTATGGATGGATGGATGGCTGGTTTGGGTGCTGCACAGCATCCTCATACAGATGCTTTTGGGCTGCTTCTATCAGAGTATACCCATCGGGTCTATGCATCTCAATTGCAGCATTTGAAGGATATAGCAGGTACCTTGGCAATGGAAGCTGCTGAAGACCTAGCTCATGTGAATAAGTTGCGCTTGGCTTTGGAATCTGTTGAACACAAAAGATTTAAGATTATACAACAAATGAGGAATGACACAGCCTTAATATCAAAAGAAGGTGGTTCGCCTATTCACAATTTGTCTGCTGCAATTGAAGGTGCTCGCCTTGCATCTCTTATAGCTCTAGATGAAATTTTAATCCAAGCCAAGGATATAATGGAACAAGCGTCAGCAGGTTCTTTAACCAAGTTCAAGAAGGAAGCACTTTTAACATCTATAAACAACCTCTCAGCACGCATGACATCACTTCTTAACATCGACCAGCCATGTGCAGAGAGACATATTTTTGATGCTCGAAGAGAAGTAGAGGATTCAATTCTGCAGTCGAAGTCGAAAGAGGCGAATCCCGGCGATGACGAAAGAACGGTGGCTGAGTGGAGCGCGCTGCAGTTCAACACGGGTTCGACGTCGCCGTTGATCGTGAAATGTGGGACGAATTCGAGGCACGAGCTGGTGATGAAAGGCGAAGGCGGAGAGATGGCGAGGGTGCTGCCGCGGCCCTCCGCCCTCTCCCAAATGAGCTACGAGGAGATCAAGGGATGCTTCGAGCAGCTGCCTGAGGCTGTTAGCGCATTGGCCCTCTCAAGGACTGCCGACGCCACTCGAGCCAATTATTCTAAACTCTTCCAGACTCTGGCCATCAAAGTGGGCGAGCTCCACAACCCTGGGATCCTCAATTGATGTCTCGTTCTCTTTTTTGGATATATGGCGGCTGCCTGCCTTTGGCTATTATTGATATTAACTCAACGCTTTTACTTTTTTGTTTTTGGTCATTCAAAACAGGGAAAAATGTATGACAAGTTTCAGCTTCGTAATATCAAATTTTGGTATTAGATATGTAAATATATAAGTTTTGTTCATCATATATATACCAAAAAAATATACACCAAAAAAATATTCAT

Network for GWHGAAEX018395

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	164	450	2.20E-64

Protein Sequence

>GWHPAAEX018395
MEEQRNRWTWDLPLFEPGSSLEWGDHKQQPPVRNSPLSSSPELRTEFERQSVNEKFHELQDQVKHARQDYLELRQEANDLIEYSNAKLSRVLRYLGVLADRTRKLDQAAIEAESRIAPLLDEKKRLFNELLTNKGNVRVFCRVRPPFEDEGPSAVGFPDEFTVCIDTGDDSLTNSKKDYEFDRVYGPHIGQGVFFNDVQPYAQSAIDGYNVSIFAFGQSNSGKTHTMEGTSQERGLYQRSFEELFDLSNMDMTSICQYKFKITAFNLYNEQIRDLLANSKSSTTTTIQMGIQDSPVELVLEDVNNPVEFSQVLKQVLMNREANSLKANVSHLVVTIHIFYTNLITREHAYSKLSLVDLPGSECLLVEDASGDQVTDFLHVSKSLSALGDVLWSLTSKKQTVSFGNSRLTKILADSIGNSSKALLIAHVCPTTSNVARTLCTLNFSARARNAELSLGNRDTIKKWKDEANDSRKELYEKDKEVQLVKLQNFELKVALKDANDQCMLLFNEIQKVWKVSFMLQTDIKSKNAILAEELKFEKDQNIQLSNQVASLLQLDHEQKMQMHEQNLNIQNLQDKIKGIKSQPKDTICSSDLRSAKCISASSFSSSKMVQNSVNSASIIRILEEEISKRDALIENLNQENEKLFDRLSENSSLGESSQVSSSFKRLASSQARNTNRSESTKAYSIDVPRSLEDKMKMMGALVKIDKPKTPAGAYLNAALMDFDPDQFDSFETIVDGANKLLMLVLAAVIKAGAAREHEILAEIRDAVLAFIRKMEPMRVMDTMLVSRVRILYIRSLLARSPELQSIKVSSVERFLGRANSGQRKTLSQGNSPVRSPVYHDSGGRSIFLIGEHAQKFEVNLSQEKKSKFSWILLKLRGIDEETLKQQITGVKLREITEEAKVFAVGFKPLAALFVHTPAGELQRQIGSWIAENFEFLSVTSSDSLGGTTGELELLSMAIMDGWMAGLGAAQHPHTDAFGLLLSEYTHRVYASQLQHLKDIAGTLAMEAAEDLAHVNKLRLALESVEHKRFKIIQQMRNDTALISKEGGSPIHNLSAAIEGARLASLIALDEILIQAKDIMEQASAGSLTKFKKEALLTSINNLSARMTSLLNIDQPCAERHIFDARREVEDSILQSKSKEANPGDDERTVAEWSALQFNTGSTSPLIVKCGTNSRHELVMKGEGGEMARVLPRPSALSQMSYEEIKGCFEQLPEAVSALALSRTADATRANYSKLFQTLAIKVGELHNPGILN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.140
SRP064423	SRR2545915	Juvenile tuber	12.270
SRP108465	SRR5643513	five period of Gastrodia elata	7.540
	SRR5643514	five period of Gastrodia elata	7.540
	SRR5643515	five period of Gastrodia elata	6.570
	SRR5643524	five period of Gastrodia elata	6.380
	SRR5643525	five period of Gastrodia elata	5.200
	SRR5643528	five period of Gastrodia elata	3.490
	SRR5643658	five period of Gastrodia elata	4.380
	SRR5643659	five period of Gastrodia elata	9.320
	SRR5643660	five period of Gastrodia elata	11.980
	SRR5643661	five period of Gastrodia elata	10.120
	SRR5643662	five period of Gastrodia elata	8.820
	SRR5643663	five period of Gastrodia elata	10.640
	SRR5643664	five period of Gastrodia elata	11.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.350
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.200
SRP279888	Gastro	Gastrodia elata tuber	24.61
	Juven	Juvenile tuber	15.19
	Mother_Gastro	Mother tuber of Gastrodia elata	12.26
	Mother_Juven	Mother tuber of Juvenile	11.86