Detail information of GWHGAAEX018398/evm.TU.scaffold_94.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|118576566|ref|YP_876309.1|5.00E-12ribosomal protein S26 [Cenarchaeum symbiosum A]
KOGKOG17689.00E-6340s ribosomal protein S26
nrgi|743788681|ref|XP_010922727.1|4.96E-70PREDICTED: 40S ribosomal protein S26-like [Elaeis guineensis]
Swissprottr|P49206|RS261_ARATH3.00E-6340S ribosomal protein S26-1
trEMBLtr|C6TAV9|C6TAV9_SOYBN3.00E-69Putative uncharacterized protein {ECO:0000313|EMBL:ACU18961.1}
TAIRAT2G405909.00E-63Ribosomal protein S26e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000092155811160549+
Transcript Sequence

Network for GWHGAAEX018398

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01283.18Ribosomal_S26e11051.50E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02976RP-S26e, RPS26 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.800
SRR2545915Juvenile tuber52.230
SRP108465SRR5643513five period of Gastrodia elata121.070
SRR5643514five period of Gastrodia elata124.220
SRR5643515five period of Gastrodia elata110.330
SRR5643524five period of Gastrodia elata124.800
SRR5643525five period of Gastrodia elata56.080
SRR5643528five period of Gastrodia elata64.400
SRR5643658five period of Gastrodia elata51.410
SRR5643659five period of Gastrodia elata183.560
SRR5643660five period of Gastrodia elata174.270
SRR5643661five period of Gastrodia elata195.650
SRR5643662five period of Gastrodia elata148.880
SRR5643663five period of Gastrodia elata163.390
SRR5643664five period of Gastrodia elata137.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_191.930
SRR6049655Rhizomagastrodiae_C368-T10_good_1143.630
SRR6049656Rhizomagastrodiae_C368-T07_good_1119.210
SRR6049657Rhizomagastrodiae_C368-T07_good_186.520
SRR6049658Rhizomagastrodiae_C368-T04_good_192.670
SRR6049659Rhizomagastrodiae_C368-T04_good_162.930
SRR6049660Rhizomagastrodiae_C368-T01_good_187.830
SRR6049661Rhizomagastrodiae_C368-T04_good_180.550
SRR6049662Rhizomagastrodiae_C368-T01_good_1127.790
SRR6049663Rhizomagastrodiae_C368-T01_good_1113.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1154.480
SRR6049665Rhizomagastrodiae_C368-T10_good_1154.480
SRP279888GastroGastrodia elata tuber 166.92
JuvenJuvenile tuber90.75
Mother_GastroMother tuber of Gastrodia elata 74.73
Mother_JuvenMother tuber of Juvenile 62.12