Detail information of GWHGAAEX018401/evm.TU.scaffold_94.10
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2575 | 0 | Glucosyltransferase - Alg6p |
| nr | gi|672139218|ref|XP_008793386.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Phoenix dactylifera] |
| Swissprot | tr|Q9FF17|ALG6_ARATH | 0 | Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase |
| trEMBL | tr|M0SWI1|M0SWI1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P07520_001} |
| TAIR | AT5G38460 | 0 | ALG6, ALG8 glycosyltransferase family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000092 | 310201 | 317249 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018401
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03155.14 | Alg6_Alg8 | 43 | 496 | 2.50E-131 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT57 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03848 | ALG6 | Metabolic pathways | map01100 |
| N-Glycan biosynthesis | map00510 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.200 |
| SRR2545915 | Juvenile tuber | 14.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.100 |
| SRR5643514 | five period of Gastrodia elata | 13.270 | |
| SRR5643515 | five period of Gastrodia elata | 11.240 | |
| SRR5643524 | five period of Gastrodia elata | 12.160 | |
| SRR5643525 | five period of Gastrodia elata | 15.800 | |
| SRR5643528 | five period of Gastrodia elata | 11.870 | |
| SRR5643658 | five period of Gastrodia elata | 17.050 | |
| SRR5643659 | five period of Gastrodia elata | 10.520 | |
| SRR5643660 | five period of Gastrodia elata | 12.960 | |
| SRR5643661 | five period of Gastrodia elata | 12.300 | |
| SRR5643662 | five period of Gastrodia elata | 12.570 | |
| SRR5643663 | five period of Gastrodia elata | 11.630 | |
| SRR5643664 | five period of Gastrodia elata | 12.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 19.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.850 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 27.100 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 26.560 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 34.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 30.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.090 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.090 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.98 |
| Juven | Juvenile tuber | 13.11 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.19 | |
| Mother_Juven | Mother tuber of Juvenile | 12.72 |