Detail information of GWHGAAEX018404/evm.TU.scaffold_94.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743782792|ref|XP_010921236.1|4.06E-72PREDICTED: uncharacterized protein LOC105044876 [Elaeis guineensis]
trEMBLtr|M0SWI5|M0SWI5_MUSAM6.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P07560_001}
TAIRAT2G461503.00E-24Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000092481245482167-
Transcript Sequence

Network for GWHGAAEX018404

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_2781724.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.120
SRR2545915Juvenile tuber38.930
SRP108465SRR5643513five period of Gastrodia elata92.150
SRR5643514five period of Gastrodia elata83.070
SRR5643515five period of Gastrodia elata94.410
SRR5643524five period of Gastrodia elata114.060
SRR5643525five period of Gastrodia elata461.650
SRR5643528five period of Gastrodia elata391.240
SRR5643658five period of Gastrodia elata658.660
SRR5643659five period of Gastrodia elata57.570
SRR5643660five period of Gastrodia elata54.110
SRR5643661five period of Gastrodia elata66.550
SRR5643662five period of Gastrodia elata83.170
SRR5643663five period of Gastrodia elata70.240
SRR5643664five period of Gastrodia elata74.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.210
SRR6049655Rhizomagastrodiae_C368-T10_good_1146.730
SRR6049656Rhizomagastrodiae_C368-T07_good_160.050
SRR6049657Rhizomagastrodiae_C368-T07_good_168.570
SRR6049658Rhizomagastrodiae_C368-T04_good_164.070
SRR6049659Rhizomagastrodiae_C368-T04_good_171.410
SRR6049660Rhizomagastrodiae_C368-T01_good_152.020
SRR6049661Rhizomagastrodiae_C368-T04_good_170.080
SRR6049662Rhizomagastrodiae_C368-T01_good_159.920
SRR6049663Rhizomagastrodiae_C368-T01_good_158.730
SRR6049664Rhizomagastrodiae_C368-T10_good_170.300
SRR6049665Rhizomagastrodiae_C368-T10_good_170.300
SRP279888GastroGastrodia elata tuber 45.06
JuvenJuvenile tuber21.82
Mother_GastroMother tuber of Gastrodia elata 125.08
Mother_JuvenMother tuber of Juvenile 73.84