Detail information of GWHGAAEX018405/evm.TU.scaffold_94.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743782788|ref|XP_010921235.1|4.09E-85PREDICTED: uncharacterized protein LOC105044875 [Elaeis guineensis]
Swissprottr|P51204|YCF54_PORPU1.00E-11Uncharacterized protein ycf54
trEMBLtr|M0RV78|M0RV78_MUSAM1.00E-77Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P24980_001}
TAIRAT5G582504.00E-59Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000092548054567959+
Transcript Sequence

Network for GWHGAAEX018405

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10674.8Ycf54831726.60E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.950
SRR2545915Juvenile tuber25.190
SRP108465SRR5643513five period of Gastrodia elata23.770
SRR5643514five period of Gastrodia elata27.260
SRR5643515five period of Gastrodia elata25.120
SRR5643524five period of Gastrodia elata24.080
SRR5643525five period of Gastrodia elata58.570
SRR5643528five period of Gastrodia elata39.630
SRR5643658five period of Gastrodia elata68.020
SRR5643659five period of Gastrodia elata29.560
SRR5643660five period of Gastrodia elata24.000
SRR5643661five period of Gastrodia elata25.390
SRR5643662five period of Gastrodia elata33.780
SRR5643663five period of Gastrodia elata38.370
SRR5643664five period of Gastrodia elata35.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.030
SRR6049655Rhizomagastrodiae_C368-T10_good_113.040
SRR6049656Rhizomagastrodiae_C368-T07_good_117.670
SRR6049657Rhizomagastrodiae_C368-T07_good_118.370
SRR6049658Rhizomagastrodiae_C368-T04_good_111.070
SRR6049659Rhizomagastrodiae_C368-T04_good_19.210
SRR6049660Rhizomagastrodiae_C368-T01_good_113.900
SRR6049661Rhizomagastrodiae_C368-T04_good_112.100
SRR6049662Rhizomagastrodiae_C368-T01_good_112.860
SRR6049663Rhizomagastrodiae_C368-T01_good_110.580
SRR6049664Rhizomagastrodiae_C368-T10_good_117.790
SRR6049665Rhizomagastrodiae_C368-T10_good_117.790
SRP279888GastroGastrodia elata tuber 25.78
JuvenJuvenile tuber34.10
Mother_GastroMother tuber of Gastrodia elata 11.20
Mother_JuvenMother tuber of Juvenile 17.56