Detail information of GWHGAAEX018422/evm.TU.scaffold_94.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|77548440|gb|ABA91237.1|1.23E-31WRKY DNA binding domain containing protein [Oryza sativa Japonica Group]
Swissprottr|Q9LY00|WRK70_ARATH6.00E-19Probable WRKY transcription factor 70
trEMBLtr|Q2RBC4|Q2RBC4_ORYSJ5.00E-32WRKY DNA binding domain containing protein {ECO:0000313|EMBL:ABA91237.1}
TAIRAT3G564002.00E-18WRKY DNA-binding protein 70

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009214466011483700+
Transcript Sequence

Network for GWHGAAEX018422

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY731331.20E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.500
SRR2545915Juvenile tuber24.060
SRP108465SRR5643513five period of Gastrodia elata13.780
SRR5643514five period of Gastrodia elata15.150
SRR5643515five period of Gastrodia elata17.770
SRR5643524five period of Gastrodia elata19.230
SRR5643525five period of Gastrodia elata2.330
SRR5643528five period of Gastrodia elata1.400
SRR5643658five period of Gastrodia elata1.240
SRR5643659five period of Gastrodia elata11.420
SRR5643660five period of Gastrodia elata6.160
SRR5643661five period of Gastrodia elata10.500
SRR5643662five period of Gastrodia elata4.430
SRR5643663five period of Gastrodia elata5.100
SRR5643664five period of Gastrodia elata3.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.910
SRR6049655Rhizomagastrodiae_C368-T10_good_16.100
SRR6049656Rhizomagastrodiae_C368-T07_good_18.820
SRR6049657Rhizomagastrodiae_C368-T07_good_19.380
SRR6049658Rhizomagastrodiae_C368-T04_good_16.270
SRR6049659Rhizomagastrodiae_C368-T04_good_12.690
SRR6049660Rhizomagastrodiae_C368-T01_good_13.840
SRR6049661Rhizomagastrodiae_C368-T04_good_19.620
SRR6049662Rhizomagastrodiae_C368-T01_good_19.550
SRR6049663Rhizomagastrodiae_C368-T01_good_13.700
SRR6049664Rhizomagastrodiae_C368-T10_good_15.660
SRR6049665Rhizomagastrodiae_C368-T10_good_15.660
SRP279888GastroGastrodia elata tuber 6.66
JuvenJuvenile tuber7.17
Mother_GastroMother tuber of Gastrodia elata 4.32
Mother_JuvenMother tuber of Juvenile 5.21