Detail information of GWHGAAEX018426/evm.TU.scaffold_94.42
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695046768|ref|XP_009411232.1| | 5.82E-123 | PREDICTED: (-)-alpha-terpineol synthase-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|B3TPQ7|ATESY_MAGGA | 2.00E-122 | Alpha-terpineol synthase, chloroplastic (Precursor) |
| trEMBL | tr|M0TKR0|M0TKR0_MUSAM | 6.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P25740_001} |
| TAIR | AT3G25810 | 2.00E-91 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000092 | 1599885 | 1661089 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018426
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01397.20 | Terpene_synth | 2 | 79 | 4.60E-12 |
| PF03936.15 | Terpene_synth_C | 110 | 376 | 4.70E-81 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0010333 | Molecular Function | terpene synthase activity |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0016829 | Molecular Function | lyase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.180 |
| SRR5643514 | five period of Gastrodia elata | 0.490 | |
| SRR5643515 | five period of Gastrodia elata | 0.440 | |
| SRR5643524 | five period of Gastrodia elata | 0.330 | |
| SRR5643525 | five period of Gastrodia elata | 1.010 | |
| SRR5643528 | five period of Gastrodia elata | 1.610 | |
| SRR5643658 | five period of Gastrodia elata | 0.280 | |
| SRR5643659 | five period of Gastrodia elata | 4.020 | |
| SRR5643660 | five period of Gastrodia elata | 1.940 | |
| SRR5643661 | five period of Gastrodia elata | 0.360 | |
| SRR5643662 | five period of Gastrodia elata | 2.170 | |
| SRR5643663 | five period of Gastrodia elata | 10.370 | |
| SRR5643664 | five period of Gastrodia elata | 1.020 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.450 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.150 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.210 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.030 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.020 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.69 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.67 | |
| Mother_Juven | Mother tuber of Juvenile | 0.15 |