Detail information of GWHGAAEX018438/evm.TU.scaffold_94.60_evm.TU.scaffold_94.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116624736|ref|YP_826892.1|4.00E-47bifunctional folylpolyglutamate synthase/ dihydrofolate synthase [Candidatus Solibacter usitatus Ellin6076]
KOGKOG25252.00E-164Folylpolyglutamate synthase
nrgi|743845674|ref|XP_010938644.1|0PREDICTED: folylpolyglutamate synthase-like [Elaeis guineensis]
Swissprottr|F4J2K2|FPGS2_ARATH0Folylpolyglutamate synthase {ECO:0000250|UniProtKB:Q05932, ECO:0000312|EMBL:CAC81075.1}
trEMBLtr|A0A067K370|A0A067K370_JATCU0Folylpolyglutamate synthase {ECO:0000256|PIRNR:PIRNR038895}
TAIRAT3G101602.00E-164DHFS-FPGS homolog C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009221856022236341-
Transcript Sequence

Network for GWHGAAEX018438

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08245.11Mur_ligase_M1382876.20E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01930FPGS Metabolic pathways map01100
Folate biosynthesismap00790

Gene Ontology

GO term OntologyName
GO:0009396Biological Processfolic acid-containing compound biosynthetic process
GO:0009058Biological Processbiosynthetic process
GO:0004326Molecular Functiontetrahydrofolylpolyglutamate synthase activity
GO:0005524Molecular FunctionATP binding
GO:0016874Molecular Functionligase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.200
SRR2545915Juvenile tuber11.440
SRP108465SRR5643513five period of Gastrodia elata7.810
SRR5643514five period of Gastrodia elata8.450
SRR5643515five period of Gastrodia elata7.480
SRR5643524five period of Gastrodia elata8.430
SRR5643525five period of Gastrodia elata10.220
SRR5643528five period of Gastrodia elata10.340
SRR5643658five period of Gastrodia elata13.760
SRR5643659five period of Gastrodia elata5.830
SRR5643660five period of Gastrodia elata6.660
SRR5643661five period of Gastrodia elata5.520
SRR5643662five period of Gastrodia elata6.170
SRR5643663five period of Gastrodia elata6.550
SRR5643664five period of Gastrodia elata7.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.030
SRR6049655Rhizomagastrodiae_C368-T10_good_18.280
SRR6049656Rhizomagastrodiae_C368-T07_good_110.090
SRR6049657Rhizomagastrodiae_C368-T07_good_110.900
SRR6049658Rhizomagastrodiae_C368-T04_good_115.000
SRR6049659Rhizomagastrodiae_C368-T04_good_115.530
SRR6049660Rhizomagastrodiae_C368-T01_good_111.600
SRR6049661Rhizomagastrodiae_C368-T04_good_112.110
SRR6049662Rhizomagastrodiae_C368-T01_good_111.260
SRR6049663Rhizomagastrodiae_C368-T01_good_113.220
SRR6049664Rhizomagastrodiae_C368-T10_good_112.030
SRR6049665Rhizomagastrodiae_C368-T10_good_112.030
SRP279888GastroGastrodia elata tuber 11.50
JuvenJuvenile tuber10.14
Mother_GastroMother tuber of Gastrodia elata 10.94
Mother_JuvenMother tuber of Juvenile 10.22