Gene detail

Detail information of GWHGAAEX018439/evm.TU.scaffold_94.61

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2043	9.00E-94	Signaling protein SWIFT and related BRCT domain proteins
nr	gi\|672189546\|ref\|XP_008775023.1\|	0	PREDICTED: uncharacterized protein LOC103695462 [Phoenix dactylifera]
trEMBL	tr\|M0SCZ2\|M0SCZ2_MUSAM	3.00E-180	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P08750_001}
TAIR	AT2G41450_1	9.00E-94	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000092	2261620	2337011	-

Transcript Sequence
>GWHTAAEX018439 ATGCAAGAGTCGGAATCTCAGGCAATTGTTTTATTTCCTCATTCCAATCTTTCCTGCTCTCCTTCCAAATTTGAAACATCTCTACTTCTCTGCTATATTTCCGTGCGAGCAGAGTATAACTCAAAAACAGTGATTTCAAAGAGATGCTACAGCAGGCGACCAACACGGACTTGGTTGCAAGATGAGGGTAGCTGCCTCACCTTACCCTATTTGCTCGCCCGCTTTTGCCTTCCCCGAGATTTGAGGTGTCGCGTCGCTTCAACAAATCGTGTACTTTTACTCTTTCAGGAAATAAAATATTCCTTTTTTTACGACCAGTTTGTTCCTCTTTCCGAAGCCAGACACGCCGGCGGCGGGGTCAGACCCGGCAAGGCAGAACTCGTGCATAAACCAGCTGGTTTTGCAGCCGTCGGAAGGCTAGCCCAGATAGAAAACCAGGACCTTCTTCAACCCGACAACCCTGTTGCTCTTCGAGGCAAAGACGGGTTTCTCCTTCCCTGTGGCCTTCCAAGGACTGGGAAAAGACCTGGAAGATCCCATGGGTTATATCTTCCGAGATCGATTTCGGGGATGATGGAGGCAGGTAATGGGAAGGAGAAGGCCTTCCTCTTGAGGTACTGGAGAACGAGCTCCTCGTCTGTGGGGTGGAATCGGAATCCGGGCGGCAGATGCAAGGAGCCGGCCTTCGCAACGCTCAATCACAGTAAGGTGGGCTATTTGAGTAGAATACACCCTCACAAGTGGTCGCTCAAAGTTCAGCGGGCCGACGATTCACGAACGATCGGTTTCGCGGGCCGGGAGAAGAGGACCAATAGTTCACAAAACGGTCGCGTCGGTTCAATTGGCGGCGACGACTGGCTGTGGCCCCCTTTTGGAGCTATGTACACCTTCAAGGCTTTCGATTATGTACACCAAATAGGGTTTCCGTTGCTTGAAGCTCCCCTAGATCCCATGTATCAAAATGCTGTCAATCTCACCAATCTTTTATGGTACTTTGCCATATTGGATTCACCAATAAATAGTACCGAGAAGTCCAATTTGATAGATTGCACTTTTGTGCTACTGAATCCAAAAGATGCAGACAGCCGTAGTAAATCTATGCTTCAGGAAACATTACAAATTTACTCGGAGGAACTTCCTTCTATGAATTATGCTGCAAATACAGGAAAAGCATCCAAATTTCTTGAAAGATGTTTGTTTAGTGGGAAATACAATACGCTAGTGTTGAGTTCAAACTCGTTCGAGGGATCAGCAAAGGTGATTGCTGCAGTGACATTTCAAATAATTCCAGTTGATACACAATTTGCTGAGATTCCCCTTGCTGTTGTTTCTTCACACTTTCAAAGAAAGGGTATTGGTTCCATGATGTGTGAAGAATTGAAAGAAAGGCTTGGAAGTGTTGGAATTTCAGCAATATTCTGCTGGGCTGATTTGGAATCTAAGCAATTTTGGCTTAAACAGGGATTTATAACTGTAGGAGTGGTAGATGGGAAAGGAAAAGCGCGCAAGCTGCCAGTAAGAGCTGATATTAAGAGAGCATTGTGCTTTCCTGGAGATGCAACTCTTATGATTTCACATCTCAAGAGGGATAGTGTAACTCTTATAAATTCTTCTCAATATGTTAAAATTAGTTTCTCTTCAAAAGCAAACACGGCAATATGTAGATATGATAAACTTTATAGACCTGAAGCTGGGGAAATTTCTAATTTTAAGACTTTATCTGCTAAGGCCACTGACCAGGGAGATTTTGAAGATGTTGCTGGAAATACATGTCTTGCTGATGAAAGAATCTCTCCTGCTCTGATAAGAGGAAAGAGGCTAGTATGGGAAGCTTCTGTTTCTTCTTTGAAATCAAAAAGAGTCAAAGGAAGTCATGTAGCTGATGATTCTGTGGGCTCTGATCCAAATTGCTACATTCTTTATGATGAAGGAAATTATGCTTGTTCAAGTGAGCACTCTATGACGTCTTTGGGGTGCCAGTCATCAAAAGAAAATCTTAACTCTATCGCCCATTATTCTAATTTGAAAAGTCATTCTCTCGGGGAAGGCTTAGCGTTGGAAAGAGCTTTCCAGGGTATTGAAGGAAACTGCCCAAGAATCTTGTTTATGAATATTGCTGATAATGATAAGAAATCAAAGCTTACAAAGATTGTAGAGGAGCTTGGTGGCTCTGTAACTTCATGTGGAAGCTCCAGCACGCATGTAATAACTGGGAAAGCAAGGAGGACATTGAATTTTTGCTTATCTTTATGCTCTGGGACTTGGATAGTTTCTGCTAGTTGGCTGAAATCTAGCTTACGAGAGGGCAAATTCTTAGATGAATCTCAGTATATTCTGGAAGATGAAGATTATTGGTTGAAGTATAAATGTCAGCTGAGGGATGCGGTTAGTAGAGCAAAAGAAAATCCCCATTCATTACTCAAAGGATATCAAATCTGCATTTCTAAGCATATCCAACCATCCACCCGTGACCTTTCATCCATTATAATTTCTGCTGGTGGGAGTGTGATCAGTGATCTGCAAAGCGTTTCCGATCTTTCAAAGACCATATTTCTGGCTTGTGAGGAAGACATGGAAAGGGCTCTGATTGCTGCAAAAATGGGCGTCCGAACTTTTAACAGCGAATGGTTTATGAACTGCGTCATGAGACAGGAACTTGACCTGGAGGCCCATCAGTTTGCCGAGTCGCTCTAGAGCCAATCCTCTACTTTGT

Network for GWHGAAEX018439

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.24	Acetyltransf_1	398	489	9.00E-07
PF16770.4	RTT107_BRCT_5	707	779	1.10E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.620
SRP064423	SRR2545915	Juvenile tuber	9.660
SRP108465	SRR5643513	five period of Gastrodia elata	6.160
	SRR5643514	five period of Gastrodia elata	4.820
	SRR5643515	five period of Gastrodia elata	5.530
	SRR5643524	five period of Gastrodia elata	5.490
	SRR5643525	five period of Gastrodia elata	7.440
	SRR5643528	five period of Gastrodia elata	5.010
	SRR5643658	five period of Gastrodia elata	7.680
	SRR5643659	five period of Gastrodia elata	2.630
	SRR5643660	five period of Gastrodia elata	1.580
	SRR5643661	five period of Gastrodia elata	1.680
	SRR5643662	five period of Gastrodia elata	2.550
	SRR5643663	five period of Gastrodia elata	1.510
	SRR5643664	five period of Gastrodia elata	2.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.620
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.300
SRP279888	Gastro	Gastrodia elata tuber	3.45
	Juven	Juvenile tuber	8.88
	Mother_Gastro	Mother tuber of Gastrodia elata	3.07
	Mother_Juven	Mother tuber of Juvenile	5.37