Gene detail

Detail information of GWHGAAEX018442/evm.TU.scaffold_94.66

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|110834442\|ref\|YP_693301.1\|	6.00E-80	hypothetical protein ABO_1581 [Alcanivorax borkumensis SK2]
KOG	KOG2214	0	Predicted esterase of the alpha-beta hydrolase superfamily
nr	gi\|695011182\|ref\|XP_009392298.1\|	0	PREDICTED: triacylglycerol lipase SDP1 isoform X1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9LZA6\|SDP1_ARATH	0	Triacylglycerol lipase SDP1
trEMBL	tr\|M0SEM1\|M0SEM1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P14540_001}
TAIR	AT5G04040	0	Patatin-like phospholipase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000092	2629535	2637755	-

Transcript Sequence
>GWHTAAEX018442 AATTATGTTGTAGAGACGGAACGAAGCATTTTTCTTCATTTTTACTTGGGAGTCAGTTATCTTCTTTCTTGCGGGAAACCTAGCATTTCCTCTTTTGTTTCGATCCGTCTGACATCATTGCACGTGCCCAATTCTTTCACGCGATCCATTTCGAGATTTTTCGCCGCTTCCCAACTATCACGGATGCCCAATCTCTCTATCCCGTTGCCATTGCACTGATTCCCACCATTATTTTATATACAAAAACCCTAGCTGCGATTGTGTTCTTATCCGCTGCATATGCTTCGGTTCGCTTCTTGTTGTTAACGGGGTTGCGCCTTCGCGGAAAATTAATCTCTGCAGGTCTCCATATTCCTATAAAGAGAAAGGCGAAAGGAAAAAGGGGAAGGGGAACGGACCTTATCTGCTCAGCAATGGACATCAGCAATGAAGCTAAGGTTGACTCCTTCGCAATCGGCCCGTCGTCGATCGTCGGCCGAGCTCTAGCATTAAAGGTGCTTTTCTCGATTTCTATGGCGCAGATTCGGCGTCGGATATGGGAATTCCTGCGGAGAATCATCTTTCCAGTCGCGTCCTGGCTGCACCCCAGGAACACGCAGGGCATCCTTGTGATGGCCGCTGTAGCTGCTCTCCTTCTGAAAAAGTTCGCAGGAAGCCGCTCGGCGGCGGATGCTACGTTTCGCCGGAGATTTTGGCGGAACATGATAAAGTGCGCGCTGACTTACGAGGAGTGGTCTCATGCTGCTAAGATGCTCGACAAGGAGATGCCGAGAGTCAATGAGTCGGAGTTCTATGACGAGGAGCTGGTGAGGTTTAAGCTCCACGAGCTGCAACAAAGGCGACAGGAGGGCTCGCTGAGGGATATTGTTTTTTGCATGAGGGCTGATCTGATGAGAAATTTGGGGAATATGTGTAATCCACAGCTTCATCAAGGCAGGCTTCAGGTTCCTAAAGTCATAAAAGACTACATTGATGAGGTGTCGACACAGCTTAAAATGGTATGCTATTCTGAATCTGAAGAGTTTCTTTTAGAAGAGCGGCTCCAGTTCATGCATGAAACCCGACATGCCTTTGGCAGGACAGCCTTGCTCCTAAGCGGCGGAGCTTCTTTAGGAGCATTCCATGTTGGTGTAGTGAAAACCTTGGTAGAGCATAAGCTTCTACCTCGTATAATTGCTGGATCCAGTGTTGGATCGATCATGTGTGCAATCGTAGCAACACGTACATGGCCTGAGAATGAGGTTTTCTTTGAGGATTCATTGCACGCCCTCAGGTTTTTTGATCAGATGGGTGGTCTCTTTGCTGTGTTCAAGAGAGTAATGATGCAAGGCGCAGTTCATGACATCCGCCAGTTGCAATCGATGCTGAGGCTTCTTACAAGCAATCTAACATTTCAGGAGGCTTATGACATGACTGGTCGAATCCTTGGAATAACAGTTTGTTCCCCCAGGAAACATGAGCCGCCAAGATGCCTTAACTATCTCACTTCCCCACATGTGGTTATATGGAGTGCGGTCACTGCTTCATGTGCTTTTCCCGGCCTATTTGAGGCTCAGGAGCTGATGGCTAAAGATAGATTTGGCAACATTATCCCATTCCATGCGCCATTCTTGGAGGGACCAGATGCAGTTTCTGGTGGTGCCGCCCGACGTTGGCGAGATGGGAGCTTGGAGATGGATTTGCCAAAGATGCAGCTGAAAGAGTTATTCAATGTGAATCATTTTATTGTTAGCCAGGCCAACCCTCATATTGCACCTTTCCTGAGAATGAAGGAGCTTGTGAGAACTTATGGAGGCAACTTTGCTGCAAAGCTTGCACATCTTGTTGAAATGGAGGTTAAACATAGATGCAGCCAGGTCCTGGAACTCGGCATTCCACTGGGTAGGATTGCTAAGCTATTTGCTCAAGAGTGGGAAGGAGACGTCACAGTTGTAATGCCTGCTACACTTGCCCAGTATTCCAAGATCATACAGAATCCAACTAATGTGGAGCTCCAGAAAGCTGTCAACCAAGGCAGAAGATGTTCTTGGGAAAAACTTTCTGTTATGAAGGCTAACTGTGCTATTGAACTCACTCTTGACGAATGTGTTGCACTTTTAAACCATCTTCGCCGGCTAAAAAGGAGTGCTGCAAGGGCTGCTAGTGCTTTGCATGGGGTGAACAACCCCTCTCATGGAGGCAGTAGTATACTCAGGCTAAACCCTTCAAGAAGAATCCCTTCTTGGAATTCCTTAGCAAGAGAGAACTCCGTAAGTTCCATTGAAGGGGACATGGTTGCAGATATGGCGTCTCAAATTAACCTGGAACAAAACCAGATAGTTGGAGATTCTTCAAGTAGAGACAATCAGGTTCACACAAGCTCGCACGAGGGAAGTGACAGTGAGCCAGAACTAAATTCTTGGACAAGGGCGGGTGGTCCCTTAATGAGAACATATTCTGCTACCAAATTTATTGATTTTGTTCGGGAACTTGAGCTTGGTTCTGAACCAAACAGAACTTTGTCGGGTTCGAGCCAAACTGAGAGTGGTGCAAGTACTTCTAGTATCATTGTGCCTGAGGGAGACTTGCTACAATCTGAGAGGATTGATAATGGAATTATACTAAGTGTTGTGAAGAGAGAAGCTGCAACAAGCACAAAGAGGGGCAGCAGGTCTGAACAGCAACAAGATTCATCTCAGGAAGAGGTTATTATAGATTGTGCTGATGGAAATTTCTTTCACAGTGTGCCTCAGACTGAAAGCTGCACAGTTAGTTCGGCTTCAGACTCCGGTGAAGATGAAGAATCAAGTTAACTCTCTGCTGTGCTGATGCCTATGATGAGACGGATAGTGTCAGTGAAACTGATGCATTGAAGTTTCTGACATGAATCACTCCTTGTTGTTATATTGAATTATTTGAATCTTTATAGGTGTGTGTATGCCAGCTATTCTCCTTTCGCTGAAAATGGCTGACCTTTTGTATATATTGTAGAGCTTTGTGCGTGGAGTAAACTTTCTTTAGATGGCAAATGTATAGTACCTTCTTGTTTGAATAGAAAGATTCTTTTAGTTTAAGGGGCTATTTGGAAAAGCAGTATTTCTGTAAGTTAGTTTACGAAATTTAAATTTTTCTAGTTTGAATCAAGTAATATGCTGAGCGACTTTTCGAATAATTTATGGGATAACATTACTT

Network for GWHGAAEX018442

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11815.7	DUF3336	90	218	4.40E-26
PF01734.21	Patatin	225	383	4.70E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14674	TGL4	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Steroid biosynthesis	map00100
		Glycerolipid metabolism	map00561
		Glycerophospholipid metabolism	map00564
		Ether lipid metabolism	map00565
		Arachidonic acid metabolism	map00590
		Linoleic acid metabolism	map00591
		alpha-Linolenic acid metabolism	map00592

Gene Ontology

GO term	Ontology	Name
GO:0006629	Biological Process	lipid metabolic process
GO:0004806	Molecular Function	triglyceride lipase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.410
SRP064423	SRR2545915	Juvenile tuber	13.870
SRP108465	SRR5643513	five period of Gastrodia elata	14.440
	SRR5643514	five period of Gastrodia elata	12.610
	SRR5643515	five period of Gastrodia elata	13.200
	SRR5643524	five period of Gastrodia elata	12.750
	SRR5643525	five period of Gastrodia elata	19.120
	SRR5643528	five period of Gastrodia elata	25.890
	SRR5643658	five period of Gastrodia elata	21.010
	SRR5643659	five period of Gastrodia elata	8.390
	SRR5643660	five period of Gastrodia elata	8.970
	SRR5643661	five period of Gastrodia elata	8.860
	SRR5643662	five period of Gastrodia elata	9.040
	SRR5643663	five period of Gastrodia elata	9.470
	SRR5643664	five period of Gastrodia elata	9.870
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	15.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.440
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.670
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.670
SRP279888	Gastro	Gastrodia elata tuber	8.60
	Juven	Juvenile tuber	13.34
	Mother_Gastro	Mother tuber of Gastrodia elata	48.74
	Mother_Juven	Mother tuber of Juvenile	30.33