Gene detail

Detail information of GWHGAAEX018445/evm.TU.scaffold_94.69

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2262	Sexual differentiation process protein ISP4
nr	gi\|568841794\|ref\|XP_006474841.1\|	PREDICTED: oligopeptide transporter 1-like [Citrus sinensis]
Swissprot	tr\|Q9SUA4\|OPT5_ARATH	Oligopeptide transporter 5
trEMBL	tr\|A0A0A0K7S9\|A0A0A0K7S9_CUCSA	Uncharacterized protein {ECO:0000313\|EMBL:KGN44392.1}
TAIR	AT4G26590	oligopeptide transporter 5

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000092	2692028	2695543	+

Transcript Sequence
>GWHTAAEX018445 TTCTAATAAACACAAAAAATGATCACATTCTACCAAAATACAACAAGTTTCTCTCTCATTCCTTTAATATACTTTATATTATCATTTTTCATCTAAAATGACTAAACTACCCTTCAGTTGCATTTATATGAGCGAGCAACTAATCCTTCTTCTCTTTGGCGATCTTATTCTCTTCCCAACTCAGAGGATCTGCAGCATAGCCGTTGGCATGGAAGGCCTTTCAGATCGTCTTCCTCCTTCAAGCCAGACTGAGCAGAAGAACTTCGATCCTTCCGAAGGCTGGCAAGTGGAGGAGAACGATCATCCGATAGAGGAGGTGAGGCTGACGGTGGAGGCGACTGACAACCCGAAGATTCCATCACTGACATTCCGAACGTGGGTTTTGGGGCTGACCTCATGCGTTGCGCTGTCGTTCGTCAACATGTTCTTCGGCTTCAGGACCAACCAGCTGAGCGTCAGCGCCATATGCGTCCAGATCGTCTCCCTCCCCATCGGAAACCTCATGGCCGCAAAGCTTCCGACGAAGCCCCTGAGGCCACTCCCCTTTCTAACAGCCTGGTCCTTCTCCCTCAACCCGGGGCCTTTCTCCATGAAGGAGCACACCCTCATCACCATCTTCGCCGGCGCCGGCGCCGGCGGCCTCTACGCCATTCACATCGTCACCATCGTCAAGGCCTTCTACCACCGCACCATCAACCCTCTACCCGCTTTCCTCCTCGCCCAGACCACCCAGCTCCTTGGCTACGGCTGGGCGGGCATCTACAGAAGGTACCTCGTCGAGTCTCCTTACATGTGGTGGCCGGCGAACCTTGTCCAAGTCTCTCTCTTCAAAGCCATGCATGTGAAGGAGAAGAGGAGGAAGGGAACGATGACGAGGTTTCAGTTCTTCATGATCGTTTTCGTCGCGAGCTTCGCGTACTACGCTGTCCCGGGGTTCATCTTCCCGACGATCTCGTACGTCTCCGTCCTCTGCGTAATCTTCAAGCGATCCGTCACGATGCAGCAGATCGGGTCCGGGATGAACGGGCTCGGAGTCGGATCCTTCGGGCTCGACTGGTCCACCGTCGCCGGGTTCCTCGGCACGCCGCTGGCCTCCCCGGCCTCCGCCATCTTCAACACGATGGCGAGCTTCGTGCTGTCGCTGTACGTGCTGGTGCCCGTCGCGTATTGGGCTGACTTCTACAGCGCCAAGCGCTTCCCTCTGATATCGGCGAACGTGTTCGACCACGACGGCCACATCTACAATACCTCCAGGATCATCGACAGCGCAACCTTCACCCTGGAAGCCCAGCAGCAGCAGAGCTATAGCAAGATCAACTTAAGCATAACCTTCGCCATAAGCTACGGCCTCAGCTTCGCGGCCCTCACGTCATCCATCATGCATGTTGCACTCTACCATGGAAAGGATGTCTGGAAGATGTGGAGAAACTCAAAGGAGCACAAGAGGGAGAGGTTGGAAGATGTTCACACAAGATTGATGAAGAAAAACTATGAGGCCGTGCCTAACTGGTGGTTCTACGTTCTCTTGATTGTCGTCGTTGCGCTCTCCATCTTCACCTGCGAAGGGTTTGGCAAACAGCTGCAGCTCCCATGGTGGGGGGTGTTATTAGCTTGTGCTATTGCTCTGTTCTTCACTTTGCCTATAGGAATCATTGTGGCAACCACAAACCAGGCGCCTGGCCTGAACGTGATCACAGAGTACATCTTCGGCTTGATGCTGCCAGGAAAACCTCTGGCGAACGTGACATTCAAAACATATGGCACTATCAGCATGGCCCAGGCTCTCTCGCTTCTCAGCGACTTAAACCTTGGGCACTACATGAAGATCGCCCCCAAGTCCATGTTCGCGGCGCAGCTGACAGGGACGATGGTGGCGTCGTCAATCTACTTCGCGACGGCGTGGTTTCTGCTGACCAGCGTGGAGCACATCTGCGACGTCGACAGTCTCCCGGAGAACAGCCCGTGGACGTGCCCGAACGACAACGTCTTCTTCAACGCCTCCGTCATCTGGGGCCTGGTCGGCCCGAAGCGGATATTCGGGAAGCTGGGGCGCTACCCTGACCTAAACTTCTTCTTCCTGGCGGGATTGCTGCTGCCCGCCCCCTTCTGGTGGCTGGCGAAGACCTTCCCGAGGAACAGGCTGCTGGCTAACGTCCACGTTCCTCTGATTTTGGTGGGAGCGAGCATCGTTCCCCCGGTGCACTCCGTGAACTACATCATGTGGGGAGCGGTCGGCATCTTCTTCAACTATTACGTGTACAGGAGGTTCAAGGGGTGGTGGGCGAGGCATAACTATCTGATGGCGGCCGCGCTGGATGCCGGGGTGGCGTTCATGGGAGTGCTCATCTTTTTCTCCTTGCAGATTAAGAACATTGGAGGGGTGGTTTGGTGGGGAGGGGCTGCTGATGATCACTGCCCGCTTGCTAAATGCCCCACAGCTCAGGGAATTCAAGTTCATGGTTGCCCGCCAGCTTAATAAGCTTAGGGCATGTGTTTGTCAGATTATGTATCTTAATAAGAGATTATAGAAACAATGATGAGGCAGAGCTTCCATCTTTCTTTATTATACCGCATTGAATTCAGCACATTTGATTCCATCATAACACTCCCCCCATTAGCAGTGCCCCTTCTTTTCTTATTTTAAAG

Network for GWHGAAEX018445

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03169.14	OPT	89	753	8.40E-158

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055085	Biological Process	transmembrane transport

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.430
SRP064423	SRR2545915	Juvenile tuber	7.030
SRP108465	SRR5643513	five period of Gastrodia elata	40.240
	SRR5643514	five period of Gastrodia elata	26.210
	SRR5643515	five period of Gastrodia elata	20.990
	SRR5643524	five period of Gastrodia elata	21.860
	SRR5643525	five period of Gastrodia elata	7.510
	SRR5643528	five period of Gastrodia elata	5.440
	SRR5643658	five period of Gastrodia elata	4.930
	SRR5643659	five period of Gastrodia elata	10.370
	SRR5643660	five period of Gastrodia elata	15.130
	SRR5643661	five period of Gastrodia elata	12.570
	SRR5643662	five period of Gastrodia elata	35.980
	SRR5643663	five period of Gastrodia elata	23.550
	SRR5643664	five period of Gastrodia elata	41.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	49.420
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	57.030
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	39.660
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	47.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	55.400
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	46.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	50.800
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	43.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.640
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	54.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	54.000
SRP279888	Gastro	Gastrodia elata tuber	41.53
	Juven	Juvenile tuber	24.64
	Mother_Gastro	Mother tuber of Gastrodia elata	23.96
	Mother_Juven	Mother tuber of Juvenile	11.26