Detail information of GWHGAAEX018450/evm.TU.scaffold_94.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|375013988|ref|YP_004990976.1|5.00E-17response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Owenweeksia hongkongensis DSM 17368]
KOGKOG16014.00E-61GATA-4/5/6 transcription factors
nrgi|743821245|ref|XP_010931988.1|8.86E-69PREDICTED: two-component response regulator ARR8-like [Elaeis guineensis]
Swissprottr|O80366|ARR9_ARATH1.00E-61Two-component response regulator ARR9
trEMBLtr|A0A059T9P7|A0A059T9P7_ROSCN3.00E-69Two-component response regulator {ECO:0000313|EMBL:AHM24030.1}
TAIRAT3G570404.00E-61response regulator 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009229947492997500+
Transcript Sequence

Network for GWHGAAEX018450

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00072.23Response_reg111222.60E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K14492ARR-A Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0000160Biological Processphosphorelay signal transduction system

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.770
SRR2545915Juvenile tuber4.460
SRP108465SRR5643513five period of Gastrodia elata9.470
SRR5643514five period of Gastrodia elata36.270
SRR5643515five period of Gastrodia elata5.970
SRR5643524five period of Gastrodia elata18.170
SRR5643525five period of Gastrodia elata22.760
SRR5643528five period of Gastrodia elata11.120
SRR5643658five period of Gastrodia elata48.400
SRR5643659five period of Gastrodia elata13.080
SRR5643660five period of Gastrodia elata13.250
SRR5643661five period of Gastrodia elata9.980
SRR5643662five period of Gastrodia elata9.090
SRR5643663five period of Gastrodia elata15.640
SRR5643664five period of Gastrodia elata11.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.830
SRR6049655Rhizomagastrodiae_C368-T10_good_19.090
SRR6049656Rhizomagastrodiae_C368-T07_good_19.620
SRR6049657Rhizomagastrodiae_C368-T07_good_14.880
SRR6049658Rhizomagastrodiae_C368-T04_good_18.020
SRR6049659Rhizomagastrodiae_C368-T04_good_14.260
SRR6049660Rhizomagastrodiae_C368-T01_good_113.970
SRR6049661Rhizomagastrodiae_C368-T04_good_15.260
SRR6049662Rhizomagastrodiae_C368-T01_good_117.820
SRR6049663Rhizomagastrodiae_C368-T01_good_118.370
SRR6049664Rhizomagastrodiae_C368-T10_good_118.180
SRR6049665Rhizomagastrodiae_C368-T10_good_118.180
SRP279888GastroGastrodia elata tuber 21.39
JuvenJuvenile tuber16.77
Mother_GastroMother tuber of Gastrodia elata 6.99
Mother_JuvenMother tuber of Juvenile 4.29