Detail information of GWHGAAEX018453/evm.TU.scaffold_94.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672166812|ref|XP_008803341.1|7.08E-90PREDICTED: uncharacterized protein LOC103716918 isoform X1 [Phoenix dactylifera]
trEMBLtr|A0A061GU17|A0A061GU17_THECC2.00E-87RING/U-box superfamily protein isoform 1 {ECO:0000313|EMBL:EOY32908.1}
TAIRAT5G194301.00E-66RING/U-box superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009232133103218270+
Transcript Sequence

Network for GWHGAAEX018453

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.5zf-RING_238821.50E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms133.910
SRR2545915Juvenile tuber203.300
SRP108465SRR5643513five period of Gastrodia elata105.900
SRR5643514five period of Gastrodia elata93.470
SRR5643515five period of Gastrodia elata103.940
SRR5643524five period of Gastrodia elata94.470
SRR5643525five period of Gastrodia elata128.970
SRR5643528five period of Gastrodia elata101.380
SRR5643658five period of Gastrodia elata143.760
SRR5643659five period of Gastrodia elata106.930
SRR5643660five period of Gastrodia elata101.450
SRR5643661five period of Gastrodia elata106.570
SRR5643662five period of Gastrodia elata92.990
SRR5643663five period of Gastrodia elata108.390
SRR5643664five period of Gastrodia elata102.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1110.670
SRR6049655Rhizomagastrodiae_C368-T10_good_1141.740
SRR6049656Rhizomagastrodiae_C368-T07_good_1103.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1111.980
SRR6049658Rhizomagastrodiae_C368-T04_good_1114.320
SRR6049659Rhizomagastrodiae_C368-T04_good_1136.120
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.230
SRR6049661Rhizomagastrodiae_C368-T04_good_1112.340
SRR6049662Rhizomagastrodiae_C368-T01_good_183.160
SRR6049663Rhizomagastrodiae_C368-T01_good_193.570
SRR6049664Rhizomagastrodiae_C368-T10_good_195.550
SRR6049665Rhizomagastrodiae_C368-T10_good_195.550
SRP279888GastroGastrodia elata tuber 143.99
JuvenJuvenile tuber97.65
Mother_GastroMother tuber of Gastrodia elata 96.86
Mother_JuvenMother tuber of Juvenile 90.62